Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm42452-201ENSMUST00000199749 617 ntBASIC6.12□□□□□ -1.43
Nup88Q8CEC0 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC6.12□□□□□ -1.43
Nup88Q8CEC0 Gm45908-201ENSMUST00000212977 1177 ntBASIC6.12□□□□□ -1.43
Nup88Q8CEC0 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC6.12□□□□□ -1.43
Nup88Q8CEC0 AC164567.4-201ENSMUST00000219708 483 ntBASIC6.12□□□□□ -1.43
Nup88Q8CEC0 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC6.12□□□□□ -1.43
Nup88Q8CEC0 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC6.12□□□□□ -1.43
Nup88Q8CEC0 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Nup88Q8CEC0 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Nup88Q8CEC0 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC6.12□□□□□ -1.43
Nup88Q8CEC0 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Nup88Q8CEC0 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Nup88Q8CEC0 Gm37357-201ENSMUST00000192386 3123 ntBASIC6.12□□□□□ -1.43
Nup88Q8CEC0 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Nup88Q8CEC0 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Nup88Q8CEC0 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Gm37890-201ENSMUST00000195610 3992 ntBASIC6.11□□□□□ -1.43
Nup88Q8CEC0 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Gm24789-201ENSMUST00000104282 131 ntBASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Gm16089-201ENSMUST00000117679 336 ntBASIC6.11□□□□□ -1.43
Nup88Q8CEC0 H3f3c-201ENSMUST00000119459 411 ntBASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Gm23354-201ENSMUST00000158426 104 ntBASIC6.11□□□□□ -1.43
Nup88Q8CEC0 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Gm17223-201ENSMUST00000171413 481 ntBASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Gm37070-201ENSMUST00000193272 460 ntBASIC6.11□□□□□ -1.43
Nup88Q8CEC0 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC6.11□□□□□ -1.43
Nup88Q8CEC0 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Nup88Q8CEC0 AC155808.1-201ENSMUST00000219288 409 ntBASIC6.11□□□□□ -1.43
Nup88Q8CEC0 AC154851.2-201ENSMUST00000222172 644 ntBASIC6.11□□□□□ -1.43
Nup88Q8CEC0 CT030182.2-201ENSMUST00000223569 620 ntBASIC6.11□□□□□ -1.43
Nup88Q8CEC0 AC153153.2-201ENSMUST00000223572 411 ntBASIC6.11□□□□□ -1.43
Nup88Q8CEC0 AC165260.4-201ENSMUST00000225924 724 ntBASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Mir31-201ENSMUST00000083474 106 ntBASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Gm43682-201ENSMUST00000202150 2090 ntBASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Gm10933-201ENSMUST00000221891 1861 ntBASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nup88Q8CEC0 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 AC169985.1-201ENSMUST00000223648 2439 ntBASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Gm37911-201ENSMUST00000193099 1545 ntBASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Gm37244-201ENSMUST00000191748 1981 ntBASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Gm13333-201ENSMUST00000119424 781 ntBASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Gm25383-201ENSMUST00000157810 144 ntBASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Gm22804-201ENSMUST00000158052 101 ntBASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Gm23162-201ENSMUST00000175081 121 ntBASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Gm37631-201ENSMUST00000192275 364 ntBASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Gm37882-201ENSMUST00000195254 196 ntBASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Gm2053-201ENSMUST00000195671 631 ntBASIC6.1□□□□□ -1.43
Nup88Q8CEC0 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Gm44623-201ENSMUST00000207934 434 ntBASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Gm45690-201ENSMUST00000210775 246 ntBASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 AC132384.6-201ENSMUST00000218976 1206 ntBASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Gm2099-201ENSMUST00000220979 412 ntBASIC6.1□□□□□ -1.43
Nup88Q8CEC0 CT956049.1-201ENSMUST00000225671 763 ntBASIC6.1□□□□□ -1.43
Nup88Q8CEC0 AC154627.3-201ENSMUST00000228441 334 ntBASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms