Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC7.55□□□□□ -1.2
Usp40Q8BWR4 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Usp40Q8BWR4 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Usp40Q8BWR4 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Usp40Q8BWR4 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
Usp40Q8BWR4 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC7.55□□□□□ -1.2
Usp40Q8BWR4 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC7.55□□□□□ -1.2
Usp40Q8BWR4 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC7.55□□□□□ -1.2
Usp40Q8BWR4 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Usp40Q8BWR4 Gm18899-201ENSMUST00000217663 546 ntBASIC7.55□□□□□ -1.2
Usp40Q8BWR4 AC153548.2-201ENSMUST00000219770 885 ntBASIC7.55□□□□□ -1.2
Usp40Q8BWR4 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC7.55□□□□□ -1.2
Usp40Q8BWR4 Gm45965-201ENSMUST00000221192 1284 ntBASIC7.55□□□□□ -1.2
Usp40Q8BWR4 AC154552.5-201ENSMUST00000222352 207 ntBASIC7.55□□□□□ -1.2
Usp40Q8BWR4 Gm18940-201ENSMUST00000222518 871 ntBASIC7.55□□□□□ -1.2
Usp40Q8BWR4 AC091783.3-201ENSMUST00000223969 681 ntBASIC7.55□□□□□ -1.2
Usp40Q8BWR4 AC156790.3-201ENSMUST00000226200 254 ntBASIC7.55□□□□□ -1.2
Usp40Q8BWR4 AC102815.1-201ENSMUST00000226662 1061 ntBASIC7.55□□□□□ -1.2
Usp40Q8BWR4 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Usp40Q8BWR4 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Usp40Q8BWR4 AC154257.1-201ENSMUST00000224811 1525 ntBASIC7.55□□□□□ -1.2
Usp40Q8BWR4 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Usp40Q8BWR4 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Usp40Q8BWR4 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Usp40Q8BWR4 AC124516.3-201ENSMUST00000221302 3613 ntBASIC7.55□□□□□ -1.2
Usp40Q8BWR4 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Usp40Q8BWR4 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Usp40Q8BWR4 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Usp40Q8BWR4 Dnm3os-201ENSMUST00000139662 7928 ntBASIC7.55□□□□□ -1.2
Usp40Q8BWR4 Gm16421-201ENSMUST00000117616 1557 ntBASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Gm21051-201ENSMUST00000221757 1688 ntBASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Gm44667-201ENSMUST00000207632 3337 ntBASIC7.54□□□□□ -1.2
Usp40Q8BWR4 AC162936.1-201ENSMUST00000223676 2368 ntBASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Mir546-201ENSMUST00000102105 121 ntBASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Gm14623-201ENSMUST00000121398 603 ntBASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Usp40Q8BWR4 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Gm27543-201ENSMUST00000183562 177 ntBASIC7.54□□□□□ -1.2
Usp40Q8BWR4 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Gm8669-201ENSMUST00000183839 945 ntBASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Mir6986-201ENSMUST00000184483 58 ntBASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Gm37882-201ENSMUST00000195254 196 ntBASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Gm44281-201ENSMUST00000203090 166 ntBASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Usp40Q8BWR4 AC156950.1-201ENSMUST00000219604 456 ntBASIC7.54□□□□□ -1.2
Usp40Q8BWR4 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC7.54□□□□□ -1.2
Usp40Q8BWR4 AV026068-224ENSMUST00000224827 928 ntBASIC7.54□□□□□ -1.2
Usp40Q8BWR4 AC192088.2-201ENSMUST00000227590 411 ntBASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Gm37086-201ENSMUST00000193082 3452 ntBASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Gm38387-201ENSMUST00000191945 2577 ntBASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Usp40Q8BWR4 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC7.53□□□□□ -1.2
Usp40Q8BWR4 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Gm42662-201ENSMUST00000202539 1431 ntBASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Gm27013-202ENSMUST00000205067 1436 ntBASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Gm37101-201ENSMUST00000191656 3660 ntBASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Gm13593-201ENSMUST00000121329 692 ntBASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Gm23537-201ENSMUST00000157536 330 ntBASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Gm23806-201ENSMUST00000175157 109 ntBASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Gm37404-201ENSMUST00000195726 359 ntBASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Gm43765-201ENSMUST00000196303 893 ntBASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Gm43238-201ENSMUST00000196463 359 ntBASIC7.53□□□□□ -1.2
Usp40Q8BWR4 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Gm43044-201ENSMUST00000198091 379 ntBASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC7.53□□□□□ -1.2
Usp40Q8BWR4 Gm21041-201ENSMUST00000214829 823 ntBASIC7.53□□□□□ -1.2
Usp40Q8BWR4 AC158536.1-201ENSMUST00000222510 256 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms