Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm23872-201ENSMUST00000175432 77 ntBASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm43308-201ENSMUST00000197236 373 ntBASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm44984-201ENSMUST00000207802 394 ntBASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm9685-201ENSMUST00000211275 538 ntBASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 AC152979.3-201ENSMUST00000217720 479 ntBASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 AC099612.2-201ENSMUST00000226824 721 ntBASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Mir129-2-201ENSMUST00000083577 90 ntBASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm45762-201ENSMUST00000212863 2619 ntBASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.35□□□□□ -1.39
Ddx55Q6ZPL9 AC158982.1-205ENSMUST00000227339 1876 ntBASIC6.34□□□□□ -1.39
Ddx55Q6ZPL9 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Ddx55Q6ZPL9 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Ddx55Q6ZPL9 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ddx55Q6ZPL9 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.39
Ddx55Q6ZPL9 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Ddx55Q6ZPL9 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.39
Ddx55Q6ZPL9 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Ddx55Q6ZPL9 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Ddx55Q6ZPL9 AC120153.1-201ENSMUST00000226502 1311 ntBASIC6.34□□□□□ -1.39
Ddx55Q6ZPL9 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
Ddx55Q6ZPL9 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ddx55Q6ZPL9 Gm25313-201ENSMUST00000101817 116 ntBASIC6.34□□□□□ -1.39
Ddx55Q6ZPL9 Gm13469-201ENSMUST00000118231 350 ntBASIC6.34□□□□□ -1.39
Ddx55Q6ZPL9 Gm12094-201ENSMUST00000121781 472 ntBASIC6.34□□□□□ -1.39
Ddx55Q6ZPL9 Gm15529-201ENSMUST00000121833 994 ntBASIC6.34□□□□□ -1.39
Ddx55Q6ZPL9 Gm25291-201ENSMUST00000122795 144 ntBASIC6.34□□□□□ -1.39
Ddx55Q6ZPL9 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ddx55Q6ZPL9 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Ddx55Q6ZPL9 Gm26310-201ENSMUST00000157766 117 ntBASIC6.34□□□□□ -1.39
Ddx55Q6ZPL9 Gm24960-201ENSMUST00000157923 90 ntBASIC6.34□□□□□ -1.39
Ddx55Q6ZPL9 Scarna13-201ENSMUST00000158164 275 ntBASIC6.34□□□□□ -1.39
Ddx55Q6ZPL9 Gm25655-201ENSMUST00000158465 290 ntBASIC6.34□□□□□ -1.39
Ddx55Q6ZPL9 Gm24735-201ENSMUST00000158859 118 ntBASIC6.34□□□□□ -1.39
Ddx55Q6ZPL9 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ddx55Q6ZPL9 Gm23287-201ENSMUST00000179427 116 ntBASIC6.34□□□□□ -1.39
Ddx55Q6ZPL9 Gm23143-201ENSMUST00000180137 116 ntBASIC6.34□□□□□ -1.39
Ddx55Q6ZPL9 Mir7012-201ENSMUST00000183900 64 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms