Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm7034-201ENSMUST00000218638 645 ntBASIC5.51□□□□□ -1.53
Foxc1Q61572 AC121966.1-201ENSMUST00000221458 282 ntBASIC5.51□□□□□ -1.53
Foxc1Q61572 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC5.51□□□□□ -1.53
Foxc1Q61572 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.51□□□□□ -1.53
Foxc1Q61572 AC161537.1-202ENSMUST00000228450 868 ntBASIC5.51□□□□□ -1.53
Foxc1Q61572 AC155237.2-201ENSMUST00000228487 478 ntBASIC5.51□□□□□ -1.53
Foxc1Q61572 AC170600.1-201ENSMUST00000228763 277 ntBASIC5.51□□□□□ -1.53
Foxc1Q61572 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Foxc1Q61572 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Foxc1Q61572 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Foxc1Q61572 Gm6166-201ENSMUST00000098689 409 ntBASIC5.51□□□□□ -1.53
Foxc1Q61572 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Foxc1Q61572 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Foxc1Q61572 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
Foxc1Q61572 Gm15170-201ENSMUST00000121593 2023 ntBASIC5.51□□□□□ -1.53
Foxc1Q61572 Gm28497-201ENSMUST00000189646 3029 ntBASIC5.51□□□□□ -1.53
Foxc1Q61572 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Foxc1Q61572 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Foxc1Q61572 Gm44078-201ENSMUST00000204652 2646 ntBASIC5.51□□□□□ -1.53
Foxc1Q61572 Gm44567-201ENSMUST00000205645 2631 ntBASIC5.51□□□□□ -1.53
Foxc1Q61572 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Foxc1Q61572 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Foxc1Q61572 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
Foxc1Q61572 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC5.51□□□□□ -1.53
Foxc1Q61572 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
Foxc1Q61572 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Foxc1Q61572 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Foxc1Q61572 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Foxc1Q61572 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Foxc1Q61572 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
Foxc1Q61572 Gm6823-201ENSMUST00000120791 1839 ntBASIC5.51□□□□□ -1.53
Foxc1Q61572 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Foxc1Q61572 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm43793-201ENSMUST00000201645 1333 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm45483-201ENSMUST00000209845 1682 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm21051-201ENSMUST00000221757 1688 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm18313-201ENSMUST00000221036 1784 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm42513-201ENSMUST00000197831 2119 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC5.5□□□□□ -1.53
Foxc1Q61572 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC5.5□□□□□ -1.53
Foxc1Q61572 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm37161-201ENSMUST00000191994 2697 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm23484-201ENSMUST00000104178 131 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm5073-201ENSMUST00000118222 820 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm15490-201ENSMUST00000119894 387 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm14428-201ENSMUST00000120408 822 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm11403-201ENSMUST00000122195 369 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Foxc1Q61572 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm11545-201ENSMUST00000146507 375 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 Mir1983-201ENSMUST00000157523 132 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm25437-201ENSMUST00000158282 132 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm23258-201ENSMUST00000158319 106 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm23581-201ENSMUST00000158531 63 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm19815-201ENSMUST00000175818 335 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm18797-201ENSMUST00000190809 1174 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC5.5□□□□□ -1.53
Foxc1Q61572 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm8454-201ENSMUST00000196980 811 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Foxc1Q61572 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm45173-201ENSMUST00000206819 305 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm44571-201ENSMUST00000208092 533 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm44561-201ENSMUST00000208869 264 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm45365-201ENSMUST00000209489 256 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm45614-201ENSMUST00000209994 721 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC5.5□□□□□ -1.53
Foxc1Q61572 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Foxc1Q61572 AC154595.2-201ENSMUST00000225067 310 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 AC157572.1-201ENSMUST00000227187 825 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 AC122341.1-201ENSMUST00000227291 560 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Foxc1Q61572 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Foxc1Q61572 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm25926-201ENSMUST00000082899 160 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Foxc1Q61572 Gm42763-201ENSMUST00000199595 2087 ntBASIC5.5□□□□□ -1.53
Foxc1Q61572 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms