Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Ccdc88aQ5SNZ0 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc88aQ5SNZ0 AC158938.1-201ENSMUST00000225372 6720 ntBASIC5.89□□□□□ -1.47
Ccdc88aQ5SNZ0 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc88aQ5SNZ0 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc88aQ5SNZ0 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm14849-201ENSMUST00000122293 2846 ntBASIC5.89□□□□□ -1.47
Ccdc88aQ5SNZ0 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm24117-201ENSMUST00000103973 133 ntBASIC5.89□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm14086-201ENSMUST00000117152 173 ntBASIC5.89□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm20673-201ENSMUST00000177167 430 ntBASIC5.89□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm8599-201ENSMUST00000193033 457 ntBASIC5.89□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC5.89□□□□□ -1.47
Ccdc88aQ5SNZ0 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC5.89□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm23875-201ENSMUST00000083711 318 ntBASIC5.89□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm23796-201ENSMUST00000084011 160 ntBASIC5.89□□□□□ -1.47
Ccdc88aQ5SNZ0 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Ccdc88aQ5SNZ0 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc88aQ5SNZ0 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc88aQ5SNZ0 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Ccdc88aQ5SNZ0 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Ccdc88aQ5SNZ0 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc88aQ5SNZ0 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm43577-201ENSMUST00000197090 3344 ntBASIC5.89□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm11878-201ENSMUST00000117908 400 ntBASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm28304-201ENSMUST00000185977 312 ntBASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm29256-201ENSMUST00000189094 312 ntBASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm28484-201ENSMUST00000190606 312 ntBASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm45651-201ENSMUST00000210857 335 ntBASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm7040-201ENSMUST00000223271 443 ntBASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm37902-201ENSMUST00000192839 1683 ntBASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm18422-202ENSMUST00000203798 2214 ntBASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm14711-201ENSMUST00000117056 217 ntBASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm16114-201ENSMUST00000161930 300 ntBASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Mir7222-201ENSMUST00000183740 75 ntBASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Mir7074-201ENSMUST00000183884 63 ntBASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm9442-201ENSMUST00000194242 319 ntBASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Ccdc88aQ5SNZ0 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm11914-201ENSMUST00000117094 507 ntBASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm12285-201ENSMUST00000117347 233 ntBASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm14046-201ENSMUST00000119389 509 ntBASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm14831-201ENSMUST00000120253 409 ntBASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm15390-201ENSMUST00000120323 738 ntBASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm15796-201ENSMUST00000162135 204 ntBASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm5734-201ENSMUST00000189787 913 ntBASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm37632-201ENSMUST00000191811 1142 ntBASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Ccdc88aQ5SNZ0 AC168056.3-201ENSMUST00000225395 2540 ntBASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm13854-201ENSMUST00000121183 1679 ntBASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms