Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.64□□□□□ -1.51
Usp39Q3TIX9 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC5.64□□□□□ -1.51
Usp39Q3TIX9 AC127242.4-201ENSMUST00000221242 470 ntBASIC5.64□□□□□ -1.51
Usp39Q3TIX9 AC123061.2-201ENSMUST00000226234 802 ntBASIC5.64□□□□□ -1.51
Usp39Q3TIX9 AC163664.2-201ENSMUST00000228894 459 ntBASIC5.64□□□□□ -1.51
Usp39Q3TIX9 Gm6776-201ENSMUST00000057752 900 ntBASIC5.64□□□□□ -1.51
Usp39Q3TIX9 Gm6195-201ENSMUST00000063059 357 ntBASIC5.64□□□□□ -1.51
Usp39Q3TIX9 Gm4822-201ENSMUST00000077551 479 ntBASIC5.64□□□□□ -1.51
Usp39Q3TIX9 Gm23624-201ENSMUST00000082463 321 ntBASIC5.64□□□□□ -1.51
Usp39Q3TIX9 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Usp39Q3TIX9 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
Usp39Q3TIX9 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Usp39Q3TIX9 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.64□□□□□ -1.51
Usp39Q3TIX9 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Usp39Q3TIX9 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Usp39Q3TIX9 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Usp39Q3TIX9 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Usp39Q3TIX9 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.64□□□□□ -1.51
Usp39Q3TIX9 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.64□□□□□ -1.51
Usp39Q3TIX9 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.64□□□□□ -1.51
Usp39Q3TIX9 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Usp39Q3TIX9 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Usp39Q3TIX9 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.64□□□□□ -1.51
Usp39Q3TIX9 Gm45562-201ENSMUST00000210015 1537 ntBASIC5.64□□□□□ -1.51
Usp39Q3TIX9 Gm4991-201ENSMUST00000118899 1552 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm44750-201ENSMUST00000206185 2223 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm6913-201ENSMUST00000100019 348 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Mir546-201ENSMUST00000102105 121 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm23440-201ENSMUST00000104299 130 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm12643-201ENSMUST00000116078 374 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm12392-201ENSMUST00000118014 938 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm12985-201ENSMUST00000118376 183 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm12994-201ENSMUST00000119601 447 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm13720-201ENSMUST00000120741 196 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm12313-201ENSMUST00000121347 421 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm11761-201ENSMUST00000121392 445 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm15038-201ENSMUST00000122144 296 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm19560-201ENSMUST00000177510 514 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm28066-201ENSMUST00000188657 472 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm38131-201ENSMUST00000192449 430 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm37341-201ENSMUST00000194680 371 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm29745-201ENSMUST00000198005 687 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm44432-201ENSMUST00000203342 938 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm44940-201ENSMUST00000206225 1247 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm45850-201ENSMUST00000212536 338 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm4510-201ENSMUST00000218265 427 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm18409-202ENSMUST00000220105 529 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 AC119894.1-201ENSMUST00000220399 350 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 AC124356.2-201ENSMUST00000221874 336 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 AC154755.1-201ENSMUST00000225244 537 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 AC133654.1-201ENSMUST00000228411 672 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 AC129208.2-201ENSMUST00000228506 320 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm8256-203ENSMUST00000228692 591 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm23456-201ENSMUST00000083335 137 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm26063-201ENSMUST00000083378 107 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm26163-201ENSMUST00000083792 178 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 AC158388.2-201ENSMUST00000223665 1314 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Gm43528-201ENSMUST00000199492 1674 ntBASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp39Q3TIX9 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Usp39Q3TIX9 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms