Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Shmt1P50431 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Shmt1P50431 Gm44660-201ENSMUST00000207134 2465 ntBASIC6□□□□□ -1.45
Shmt1P50431 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Shmt1P50431 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
Shmt1P50431 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Shmt1P50431 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Shmt1P50431 Gm38257-201ENSMUST00000195881 2761 ntBASIC6□□□□□ -1.45
Shmt1P50431 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6□□□□□ -1.45
Shmt1P50431 Gm25919-201ENSMUST00000104271 132 ntBASIC6□□□□□ -1.45
Shmt1P50431 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC6□□□□□ -1.45
Shmt1P50431 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC6□□□□□ -1.45
Shmt1P50431 Gm12636-201ENSMUST00000117395 624 ntBASIC6□□□□□ -1.45
Shmt1P50431 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC6□□□□□ -1.45
Shmt1P50431 Gm13501-201ENSMUST00000118477 979 ntBASIC6□□□□□ -1.45
Shmt1P50431 Gm13533-201ENSMUST00000121104 177 ntBASIC6□□□□□ -1.45
Shmt1P50431 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Shmt1P50431 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC6□□□□□ -1.45
Shmt1P50431 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC6□□□□□ -1.45
Shmt1P50431 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Shmt1P50431 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC6□□□□□ -1.45
Shmt1P50431 Gm8032-201ENSMUST00000171009 574 ntBASIC6□□□□□ -1.45
Shmt1P50431 Gm3242-201ENSMUST00000171273 485 ntBASIC6□□□□□ -1.45
Shmt1P50431 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Shmt1P50431 Gm38061-201ENSMUST00000192490 365 ntBASIC6□□□□□ -1.45
Shmt1P50431 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC6□□□□□ -1.45
Shmt1P50431 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC6□□□□□ -1.45
Shmt1P50431 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC6□□□□□ -1.45
Shmt1P50431 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC6□□□□□ -1.45
Shmt1P50431 Gm6520-201ENSMUST00000200636 410 ntBASIC6□□□□□ -1.45
Shmt1P50431 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC6□□□□□ -1.45
Shmt1P50431 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC6□□□□□ -1.45
Shmt1P50431 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6□□□□□ -1.45
Shmt1P50431 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC6□□□□□ -1.45
Shmt1P50431 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC6□□□□□ -1.45
Shmt1P50431 AC153800.1-201ENSMUST00000219212 365 ntBASIC6□□□□□ -1.45
Shmt1P50431 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC6□□□□□ -1.45
Shmt1P50431 Gm9973-202ENSMUST00000220926 166 ntBASIC6□□□□□ -1.45
Shmt1P50431 Gm36501-201ENSMUST00000221857 745 ntBASIC6□□□□□ -1.45
Shmt1P50431 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC6□□□□□ -1.45
Shmt1P50431 AC122858.1-201ENSMUST00000226212 433 ntBASIC6□□□□□ -1.45
Shmt1P50431 AC122858.3-201ENSMUST00000226341 740 ntBASIC6□□□□□ -1.45
Shmt1P50431 AC122858.1-202ENSMUST00000228290 986 ntBASIC6□□□□□ -1.45
Shmt1P50431 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC6□□□□□ -1.45
Shmt1P50431 Gm6104-201ENSMUST00000078030 603 ntBASIC6□□□□□ -1.45
Shmt1P50431 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Shmt1P50431 Gm23330-201ENSMUST00000082660 164 ntBASIC6□□□□□ -1.45
Shmt1P50431 Gm22807-201ENSMUST00000082737 129 ntBASIC6□□□□□ -1.45
Shmt1P50431 Gm23686-201ENSMUST00000083241 164 ntBASIC6□□□□□ -1.45
Shmt1P50431 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC6□□□□□ -1.45
Shmt1P50431 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC6□□□□□ -1.45
Shmt1P50431 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC6□□□□□ -1.45
Shmt1P50431 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Shmt1P50431 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Shmt1P50431 Gm42781-201ENSMUST00000201317 2719 ntBASIC6□□□□□ -1.45
Shmt1P50431 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Shmt1P50431 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC6□□□□□ -1.45
Shmt1P50431 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Shmt1P50431 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Shmt1P50431 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Shmt1P50431 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.99□□□□□ -1.45
Shmt1P50431 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Shmt1P50431 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.99□□□□□ -1.45
Shmt1P50431 Gm11290-204ENSMUST00000224688 3042 ntBASIC5.99□□□□□ -1.45
Shmt1P50431 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Shmt1P50431 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
Shmt1P50431 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.99□□□□□ -1.45
Shmt1P50431 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Shmt1P50431 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.99□□□□□ -1.45
Shmt1P50431 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Shmt1P50431 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Shmt1P50431 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC5.99□□□□□ -1.45
Shmt1P50431 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC5.99□□□□□ -1.45
Shmt1P50431 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC5.99□□□□□ -1.45
Shmt1P50431 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC5.99□□□□□ -1.45
Shmt1P50431 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Shmt1P50431 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.99□□□□□ -1.45
Shmt1P50431 Gm5381-201ENSMUST00000117975 1250 ntBASIC5.99□□□□□ -1.45
Shmt1P50431 Gm4989-201ENSMUST00000118711 749 ntBASIC5.99□□□□□ -1.45
Shmt1P50431 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.99□□□□□ -1.45
Shmt1P50431 Gm11481-201ENSMUST00000120069 255 ntBASIC5.99□□□□□ -1.45
Shmt1P50431 Gm13593-201ENSMUST00000121329 692 ntBASIC5.99□□□□□ -1.45
Shmt1P50431 Gm12706-201ENSMUST00000121588 698 ntBASIC5.99□□□□□ -1.45
Shmt1P50431 Gm16411-201ENSMUST00000122164 1100 ntBASIC5.99□□□□□ -1.45
Shmt1P50431 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC5.99□□□□□ -1.45
Shmt1P50431 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC5.99□□□□□ -1.45
Shmt1P50431 Gm25906-201ENSMUST00000158489 126 ntBASIC5.99□□□□□ -1.45
Shmt1P50431 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Shmt1P50431 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Shmt1P50431 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Shmt1P50431 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Shmt1P50431 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Shmt1P50431 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Shmt1P50431 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Shmt1P50431 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Shmt1P50431 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Shmt1P50431 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC5.99□□□□□ -1.45
Shmt1P50431 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5.99□□□□□ -1.45
Shmt1P50431 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC5.99□□□□□ -1.45
Shmt1P50431 Igkv3-8-201ENSMUST00000197635 339 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms