Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 AC154788.1-201ENSMUST00000225003 340 ntBASIC5.3□□□□□ -1.56
Cxcl12P40224 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cxcl12P40224 Gm5321-201ENSMUST00000072050 447 ntBASIC5.3□□□□□ -1.56
Cxcl12P40224 Smc5-206ENSMUST00000226111 3265 ntBASIC5.3□□□□□ -1.56
Cxcl12P40224 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.3□□□□□ -1.56
Cxcl12P40224 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cxcl12P40224 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Cxcl12P40224 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.3□□□□□ -1.56
Cxcl12P40224 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cxcl12P40224 Gm45493-201ENSMUST00000209494 3948 ntBASIC5.29□□□□□ -1.56
Cxcl12P40224 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Cxcl12P40224 Gm37916-201ENSMUST00000192153 2435 ntBASIC5.29□□□□□ -1.56
Cxcl12P40224 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cxcl12P40224 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cxcl12P40224 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.29□□□□□ -1.56
Cxcl12P40224 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cxcl12P40224 AC113031.7-201ENSMUST00000228609 1928 ntBASIC5.29□□□□□ -1.56
Cxcl12P40224 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cxcl12P40224 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.29□□□□□ -1.56
Cxcl12P40224 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.29□□□□□ -1.56
Cxcl12P40224 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
Cxcl12P40224 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.29□□□□□ -1.56
Cxcl12P40224 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.29□□□□□ -1.56
Cxcl12P40224 Gm42508-201ENSMUST00000199972 3292 ntBASIC5.29□□□□□ -1.56
Cxcl12P40224 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cxcl12P40224 Gm14995-201ENSMUST00000117135 391 ntBASIC5.29□□□□□ -1.56
Cxcl12P40224 Gm7363-201ENSMUST00000119883 399 ntBASIC5.29□□□□□ -1.56
Cxcl12P40224 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.29□□□□□ -1.56
Cxcl12P40224 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.29□□□□□ -1.56
Cxcl12P40224 Gm22569-201ENSMUST00000175545 124 ntBASIC5.29□□□□□ -1.56
Cxcl12P40224 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Cxcl12P40224 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cxcl12P40224 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC5.29□□□□□ -1.56
Cxcl12P40224 Gm44487-201ENSMUST00000205145 325 ntBASIC5.29□□□□□ -1.56
Cxcl12P40224 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cxcl12P40224 AC154527.3-201ENSMUST00000225519 989 ntBASIC5.29□□□□□ -1.56
Cxcl12P40224 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.29□□□□□ -1.56
Cxcl12P40224 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cxcl12P40224 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Cxcl12P40224 Gm5746-201ENSMUST00000183550 2200 ntBASIC5.29□□□□□ -1.56
Cxcl12P40224 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cxcl12P40224 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
Cxcl12P40224 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Cxcl12P40224 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cxcl12P40224 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Cxcl12P40224 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cxcl12P40224 CT025675.1-201ENSMUST00000228171 1567 ntBASIC5.29□□□□□ -1.56
Cxcl12P40224 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cxcl12P40224 AC123705.3-201ENSMUST00000223531 2069 ntBASIC5.28□□□□□ -1.56
Cxcl12P40224 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cxcl12P40224 Gm37127-201ENSMUST00000192924 3036 ntBASIC5.28□□□□□ -1.56
Cxcl12P40224 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cxcl12P40224 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Cxcl12P40224 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Cxcl12P40224 Gm15357-201ENSMUST00000119160 285 ntBASIC5.28□□□□□ -1.56
Cxcl12P40224 Gm14908-201ENSMUST00000120930 1286 ntBASIC5.28□□□□□ -1.56
Cxcl12P40224 Gm12007-201ENSMUST00000120978 597 ntBASIC5.28□□□□□ -1.56
Cxcl12P40224 Gm13808-201ENSMUST00000121353 184 ntBASIC5.28□□□□□ -1.56
Cxcl12P40224 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC5.28□□□□□ -1.56
Cxcl12P40224 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Cxcl12P40224 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC5.28□□□□□ -1.56
Cxcl12P40224 Gm25116-201ENSMUST00000157191 122 ntBASIC5.28□□□□□ -1.56
Cxcl12P40224 Gm26362-201ENSMUST00000158865 315 ntBASIC5.28□□□□□ -1.56
Cxcl12P40224 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Cxcl12P40224 Gm27568-201ENSMUST00000184220 99 ntBASIC5.28□□□□□ -1.56
Cxcl12P40224 Gm5244-202ENSMUST00000189517 743 ntBASIC5.28□□□□□ -1.56
Cxcl12P40224 Gm37884-201ENSMUST00000191857 818 ntBASIC5.28□□□□□ -1.56
Cxcl12P40224 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cxcl12P40224 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC5.28□□□□□ -1.56
Cxcl12P40224 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC5.28□□□□□ -1.56
Cxcl12P40224 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC5.28□□□□□ -1.56
Cxcl12P40224 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Cxcl12P40224 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Cxcl12P40224 Gm25260-201ENSMUST00000083053 134 ntBASIC5.28□□□□□ -1.56
Cxcl12P40224 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.28□□□□□ -1.56
Cxcl12P40224 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cxcl12P40224 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Cxcl12P40224 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Cxcl12P40224 Gm37967-201ENSMUST00000195634 2665 ntBASIC5.28□□□□□ -1.56
Cxcl12P40224 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Cxcl12P40224 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cxcl12P40224 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cxcl12P40224 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cxcl12P40224 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cxcl12P40224 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cxcl12P40224 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cxcl12P40224 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cxcl12P40224 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cxcl12P40224 Gm14878-201ENSMUST00000118167 293 ntBASIC5.27□□□□□ -1.57
Cxcl12P40224 Gm14610-201ENSMUST00000118358 966 ntBASIC5.27□□□□□ -1.57
Cxcl12P40224 Gm12654-201ENSMUST00000120387 587 ntBASIC5.27□□□□□ -1.57
Cxcl12P40224 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC5.27□□□□□ -1.57
Cxcl12P40224 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5.27□□□□□ -1.57
Cxcl12P40224 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cxcl12P40224 Gm16250-201ENSMUST00000148974 256 ntBASIC5.27□□□□□ -1.57
Cxcl12P40224 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cxcl12P40224 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC5.27□□□□□ -1.57
Cxcl12P40224 Gm6632-201ENSMUST00000168425 954 ntBASIC5.27□□□□□ -1.57
Cxcl12P40224 Mir6414-201ENSMUST00000183685 82 ntBASIC5.27□□□□□ -1.57
Cxcl12P40224 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 126.8 ms