Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Lire1P11260 Gm16335-201ENSMUST00000077495 309 ntBASIC5.34□□□□□ -1.55
Lire1P11260 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Lire1P11260 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC5.34□□□□□ -1.55
Lire1P11260 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Lire1P11260 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
Lire1P11260 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Lire1P11260 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Lire1P11260 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Lire1P11260 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.56
Lire1P11260 Gm8402-201ENSMUST00000118183 1770 ntBASIC5.34□□□□□ -1.56
Lire1P11260 Gm8383-201ENSMUST00000121179 1770 ntBASIC5.34□□□□□ -1.56
Lire1P11260 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Lire1P11260 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.34□□□□□ -1.56
Lire1P11260 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Lire1P11260 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
Lire1P11260 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Lire1P11260 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Lire1P11260 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Lire1P11260 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Lire1P11260 Gm8674-201ENSMUST00000179367 3047 ntBASIC5.33□□□□□ -1.56
Lire1P11260 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Lire1P11260 Gm12667-201ENSMUST00000118299 1332 ntBASIC5.33□□□□□ -1.56
Lire1P11260 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Lire1P11260 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Lire1P11260 Mir466j-201ENSMUST00000116876 122 ntBASIC5.33□□□□□ -1.56
Lire1P11260 Gm11481-201ENSMUST00000120069 255 ntBASIC5.33□□□□□ -1.56
Lire1P11260 Gm11350-201ENSMUST00000121436 870 ntBASIC5.33□□□□□ -1.56
Lire1P11260 Gm12936-201ENSMUST00000121439 301 ntBASIC5.33□□□□□ -1.56
Lire1P11260 Gm12041-201ENSMUST00000121606 602 ntBASIC5.33□□□□□ -1.56
Lire1P11260 Gm14970-201ENSMUST00000122289 355 ntBASIC5.33□□□□□ -1.56
Lire1P11260 Gm24628-201ENSMUST00000122761 289 ntBASIC5.33□□□□□ -1.56
Lire1P11260 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Lire1P11260 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.33□□□□□ -1.56
Lire1P11260 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Lire1P11260 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Lire1P11260 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC5.33□□□□□ -1.56
Lire1P11260 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.33□□□□□ -1.56
Lire1P11260 Gm37030-201ENSMUST00000194254 295 ntBASIC5.33□□□□□ -1.56
Lire1P11260 Gm37900-201ENSMUST00000195510 3805 ntBASIC5.33□□□□□ -1.56
Lire1P11260 Gm29745-201ENSMUST00000198005 687 ntBASIC5.33□□□□□ -1.56
Lire1P11260 Gm44316-201ENSMUST00000199274 97 ntBASIC5.33□□□□□ -1.56
Lire1P11260 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.33□□□□□ -1.56
Lire1P11260 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.33□□□□□ -1.56
Lire1P11260 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Lire1P11260 Gm44134-202ENSMUST00000204777 545 ntBASIC5.33□□□□□ -1.56
Lire1P11260 Gm4290-201ENSMUST00000206897 814 ntBASIC5.33□□□□□ -1.56
Lire1P11260 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC5.33□□□□□ -1.56
Lire1P11260 Gm31166-201ENSMUST00000209326 288 ntBASIC5.33□□□□□ -1.56
Lire1P11260 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC5.33□□□□□ -1.56
Lire1P11260 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC5.33□□□□□ -1.56
Lire1P11260 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC5.33□□□□□ -1.56
Lire1P11260 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Lire1P11260 AC154767.2-201ENSMUST00000224584 414 ntBASIC5.33□□□□□ -1.56
Lire1P11260 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Lire1P11260 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Lire1P11260 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Lire1P11260 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Lire1P11260 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Lire1P11260 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Lire1P11260 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Lire1P11260 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Lire1P11260 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Lire1P11260 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Lire1P11260 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Lire1P11260 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Lire1P11260 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Lire1P11260 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC5.33□□□□□ -1.56
Lire1P11260 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Lire1P11260 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Lire1P11260 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Lire1P11260 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Lire1P11260 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lire1P11260 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Lire1P11260 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Lire1P11260 Gm38125-201ENSMUST00000194136 3438 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Lire1P11260 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lire1P11260 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Lire1P11260 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lire1P11260 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Lire1P11260 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lire1P11260 Gm24142-201ENSMUST00000101960 107 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Lire1P11260 Gm15074-201ENSMUST00000117603 936 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Gm13557-201ENSMUST00000120771 382 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Lire1P11260 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lire1P11260 Gm25152-201ENSMUST00000157117 114 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Gm23149-201ENSMUST00000158837 230 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Lire1P11260 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Lire1P11260 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Lire1P11260 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Gm5430-201ENSMUST00000182525 915 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Gm28943-201ENSMUST00000186187 615 ntBASIC5.32□□□□□ -1.56
Lire1P11260 Gm28736-201ENSMUST00000186257 615 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms