Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm14517-201ENSMUST00000119040 337 ntBASIC5.62□□□□□ -1.51
Hoxd3P09027 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm13486-201ENSMUST00000119910 282 ntBASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm16100-201ENSMUST00000120489 231 ntBASIC5.62□□□□□ -1.51
Hoxd3P09027 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm23465-201ENSMUST00000157134 262 ntBASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm22519-201ENSMUST00000158270 178 ntBASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm25718-201ENSMUST00000158632 118 ntBASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm8715-201ENSMUST00000162728 531 ntBASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm23793-201ENSMUST00000179396 117 ntBASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm5787-201ENSMUST00000183049 1038 ntBASIC5.62□□□□□ -1.51
Hoxd3P09027 Mir6403-201ENSMUST00000185007 129 ntBASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm36999-201ENSMUST00000192756 1046 ntBASIC5.62□□□□□ -1.51
Hoxd3P09027 Ighv1-21-201ENSMUST00000194856 351 ntBASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm43147-201ENSMUST00000196944 542 ntBASIC5.62□□□□□ -1.51
Hoxd3P09027 Mir142-201ENSMUST00000198092 64 ntBASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm43315-201ENSMUST00000198120 313 ntBASIC5.62□□□□□ -1.51
Hoxd3P09027 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm44565-201ENSMUST00000208194 269 ntBASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm45614-201ENSMUST00000209994 721 ntBASIC5.62□□□□□ -1.51
Hoxd3P09027 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm21112-201ENSMUST00000212224 578 ntBASIC5.62□□□□□ -1.51
Hoxd3P09027 AC152415.1-201ENSMUST00000213320 440 ntBASIC5.62□□□□□ -1.51
Hoxd3P09027 AC154595.2-201ENSMUST00000225067 310 ntBASIC5.62□□□□□ -1.51
Hoxd3P09027 AL589742.1-201ENSMUST00000226034 349 ntBASIC5.62□□□□□ -1.51
Hoxd3P09027 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxd3P09027 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxd3P09027 Mir138-2-201ENSMUST00000083578 71 ntBASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxd3P09027 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxd3P09027 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxd3P09027 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm14988-201ENSMUST00000117224 1548 ntBASIC5.62□□□□□ -1.51
Hoxd3P09027 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxd3P09027 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxd3P09027 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxd3P09027 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxd3P09027 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxd3P09027 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxd3P09027 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxd3P09027 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Hoxd3P09027 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Hoxd3P09027 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxd3P09027 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Hoxd3P09027 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Hoxd3P09027 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Hoxd3P09027 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm37372-201ENSMUST00000193577 3311 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Hoxd3P09027 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Hoxd3P09027 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm23437-201ENSMUST00000104036 127 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm12149-201ENSMUST00000117511 654 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm15078-201ENSMUST00000118371 782 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm8421-201ENSMUST00000119439 305 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm14787-201ENSMUST00000121236 388 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm14695-201ENSMUST00000121721 282 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Hoxd3P09027 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm11545-201ENSMUST00000146507 375 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm25339-201ENSMUST00000157458 232 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm24584-201ENSMUST00000157972 107 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm2976-201ENSMUST00000160362 513 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm22348-201ENSMUST00000178674 79 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm21182-201ENSMUST00000178899 794 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm22286-201ENSMUST00000179708 107 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm28666-201ENSMUST00000186649 274 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC5.61□□□□□ -1.51
Hoxd3P09027 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm35108-201ENSMUST00000194321 699 ntBASIC5.61□□□□□ -1.51
Hoxd3P09027 Gm33191-201ENSMUST00000195604 699 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms