Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Hmgb3O54879 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
Hmgb3O54879 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC4.05□□□□□ -1.76
Hmgb3O54879 Gm9127-201ENSMUST00000188041 985 ntBASIC4.05□□□□□ -1.76
Hmgb3O54879 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Hmgb3O54879 Gm8920-201ENSMUST00000196153 924 ntBASIC4.05□□□□□ -1.76
Hmgb3O54879 Gm42869-201ENSMUST00000199953 2121 ntBASIC4.05□□□□□ -1.76
Hmgb3O54879 Gm43794-201ENSMUST00000200971 692 ntBASIC4.05□□□□□ -1.76
Hmgb3O54879 Gm44252-201ENSMUST00000204187 330 ntBASIC4.05□□□□□ -1.76
Hmgb3O54879 Gm30646-201ENSMUST00000207662 180 ntBASIC4.05□□□□□ -1.76
Hmgb3O54879 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC4.05□□□□□ -1.76
Hmgb3O54879 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Hmgb3O54879 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC4.05□□□□□ -1.76
Hmgb3O54879 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC4.05□□□□□ -1.76
Hmgb3O54879 Gm7688-201ENSMUST00000212857 337 ntBASIC4.05□□□□□ -1.76
Hmgb3O54879 AC153553.1-201ENSMUST00000218257 684 ntBASIC4.05□□□□□ -1.76
Hmgb3O54879 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Hmgb3O54879 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.05□□□□□ -1.76
Hmgb3O54879 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Hmgb3O54879 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC4.05□□□□□ -1.76
Hmgb3O54879 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.05□□□□□ -1.76
Hmgb3O54879 AC137871.3-201ENSMUST00000226628 225 ntBASIC4.05□□□□□ -1.76
Hmgb3O54879 AC102139.1-201ENSMUST00000227000 251 ntBASIC4.05□□□□□ -1.76
Hmgb3O54879 Cma2-202ENSMUST00000228263 857 ntBASIC4.05□□□□□ -1.76
Hmgb3O54879 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Hmgb3O54879 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Hmgb3O54879 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Hmgb3O54879 Olfr467-201ENSMUST00000084756 927 ntBASIC4.05□□□□□ -1.76
Hmgb3O54879 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC4.05□□□□□ -1.76
Hmgb3O54879 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Hmgb3O54879 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Hmgb3O54879 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Hmgb3O54879 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Hmgb3O54879 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Hmgb3O54879 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Hmgb3O54879 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Hmgb3O54879 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Hmgb3O54879 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.05□□□□□ -1.76
Hmgb3O54879 Gm7416-201ENSMUST00000117448 1487 ntBASIC4.05□□□□□ -1.76
Hmgb3O54879 Gm19176-201ENSMUST00000222149 1831 ntBASIC4.05□□□□□ -1.76
Hmgb3O54879 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.04□□□□□ -1.76
Hmgb3O54879 Gm38029-201ENSMUST00000192669 2090 ntBASIC4.04□□□□□ -1.76
Hmgb3O54879 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Hmgb3O54879 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Hmgb3O54879 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC4.04□□□□□ -1.76
Hmgb3O54879 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC4.04□□□□□ -1.76
Hmgb3O54879 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Hmgb3O54879 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Hmgb3O54879 Gm26078-201ENSMUST00000104067 128 ntBASIC4.04□□□□□ -1.76
Hmgb3O54879 Gm15779-201ENSMUST00000117470 412 ntBASIC4.04□□□□□ -1.76
Hmgb3O54879 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC4.04□□□□□ -1.76
Hmgb3O54879 Gm14082-201ENSMUST00000118582 801 ntBASIC4.04□□□□□ -1.76
Hmgb3O54879 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.04□□□□□ -1.76
Hmgb3O54879 Gm16463-201ENSMUST00000120527 721 ntBASIC4.04□□□□□ -1.76
Hmgb3O54879 Gm12007-201ENSMUST00000120978 597 ntBASIC4.04□□□□□ -1.76
Hmgb3O54879 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC4.04□□□□□ -1.76
Hmgb3O54879 Gm13738-201ENSMUST00000122437 469 ntBASIC4.04□□□□□ -1.76
Hmgb3O54879 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Hmgb3O54879 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.04□□□□□ -1.76
Hmgb3O54879 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Hmgb3O54879 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Hmgb3O54879 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC4.04□□□□□ -1.76
Hmgb3O54879 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.04□□□□□ -1.76
Hmgb3O54879 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Hmgb3O54879 Gm17137-202ENSMUST00000165729 957 ntBASIC4.04□□□□□ -1.76
Hmgb3O54879 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Hmgb3O54879 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC4.04□□□□□ -1.76
Hmgb3O54879 Gm26731-201ENSMUST00000180683 543 ntBASIC4.04□□□□□ -1.76
Hmgb3O54879 Gm29484-201ENSMUST00000186067 324 ntBASIC4.04□□□□□ -1.76
Hmgb3O54879 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Hmgb3O54879 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC4.04□□□□□ -1.76
Hmgb3O54879 Gm38166-201ENSMUST00000191660 471 ntBASIC4.04□□□□□ -1.76
Hmgb3O54879 Gm29813-201ENSMUST00000195856 447 ntBASIC4.04□□□□□ -1.76
Hmgb3O54879 Igkv12-67-201ENSMUST00000197806 354 ntBASIC4.04□□□□□ -1.76
Hmgb3O54879 Gm43215-201ENSMUST00000199108 252 ntBASIC4.04□□□□□ -1.76
Hmgb3O54879 Ighv1-83-201ENSMUST00000199643 351 ntBASIC4.04□□□□□ -1.76
Hmgb3O54879 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC4.04□□□□□ -1.76
Hmgb3O54879 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC4.04□□□□□ -1.76
Hmgb3O54879 Gm45171-201ENSMUST00000206360 736 ntBASIC4.04□□□□□ -1.76
Hmgb3O54879 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC4.04□□□□□ -1.76
Hmgb3O54879 AC131029.2-201ENSMUST00000226696 628 ntBASIC4.04□□□□□ -1.76
Hmgb3O54879 Mir99a-201ENSMUST00000083596 65 ntBASIC4.04□□□□□ -1.76
Hmgb3O54879 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Hmgb3O54879 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Hmgb3O54879 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.04□□□□□ -1.76
Hmgb3O54879 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Hmgb3O54879 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Hmgb3O54879 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.03□□□□□ -1.76
Hmgb3O54879 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Hmgb3O54879 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Hmgb3O54879 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmgb3O54879 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Hmgb3O54879 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC4.03□□□□□ -1.76
Hmgb3O54879 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Hmgb3O54879 Gm24350-201ENSMUST00000104163 133 ntBASIC4.03□□□□□ -1.76
Hmgb3O54879 Gm22372-201ENSMUST00000104589 136 ntBASIC4.03□□□□□ -1.76
Hmgb3O54879 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmgb3O54879 Gm11737-201ENSMUST00000118713 468 ntBASIC4.03□□□□□ -1.76
Hmgb3O54879 Gm7657-201ENSMUST00000118851 666 ntBASIC4.03□□□□□ -1.76
Hmgb3O54879 Gm13690-201ENSMUST00000118989 285 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms