Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm20819-201ENSMUST00000191091 925 ntBASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm20871-201ENSMUST00000191322 931 ntBASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm37421-201ENSMUST00000193088 132 ntBASIC4.88□□□□□ -1.63
Cdc40Q9DC48 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm42814-201ENSMUST00000199370 460 ntBASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm44281-201ENSMUST00000203090 166 ntBASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm18468-201ENSMUST00000207321 369 ntBASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm18470-201ENSMUST00000207467 420 ntBASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm18465-201ENSMUST00000207468 369 ntBASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm18464-201ENSMUST00000207803 420 ntBASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm18458-201ENSMUST00000207908 369 ntBASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm18461-201ENSMUST00000208421 420 ntBASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm7688-201ENSMUST00000212857 337 ntBASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm45789-201ENSMUST00000213038 364 ntBASIC4.88□□□□□ -1.63
Cdc40Q9DC48 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm25187-201ENSMUST00000083906 133 ntBASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm20287-201ENSMUST00000172848 2367 ntBASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC4.87□□□□□ -1.63
Cdc40Q9DC48 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 AC162467.3-201ENSMUST00000219716 2172 ntBASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm45819-201ENSMUST00000210940 1751 ntBASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm13771-201ENSMUST00000117988 238 ntBASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm13506-201ENSMUST00000120391 1083 ntBASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm11825-201ENSMUST00000120710 736 ntBASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm24685-201ENSMUST00000157764 285 ntBASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Scarna13-201ENSMUST00000158164 275 ntBASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm18802-201ENSMUST00000186270 888 ntBASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm29356-201ENSMUST00000186935 373 ntBASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm37700-201ENSMUST00000192617 965 ntBASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Mir409-201ENSMUST00000198153 79 ntBASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm43631-201ENSMUST00000202011 369 ntBASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm45660-201ENSMUST00000210267 151 ntBASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC4.87□□□□□ -1.63
Cdc40Q9DC48 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm23514-201ENSMUST00000082827 130 ntBASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm9386-201ENSMUST00000095195 381 ntBASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm44424-201ENSMUST00000203438 1826 ntBASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdc40Q9DC48 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms