Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Vps28Q9D1C8 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Vps28Q9D1C8 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Vps28Q9D1C8 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC5.56□□□□□ -1.52
Vps28Q9D1C8 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Gm23750-201ENSMUST00000104222 132 ntBASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Gm12131-201ENSMUST00000117479 359 ntBASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Gm9085-201ENSMUST00000119994 1072 ntBASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Gm11677-201ENSMUST00000121349 977 ntBASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Gm5392-201ENSMUST00000122189 789 ntBASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Gm18728-201ENSMUST00000186155 753 ntBASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Gm17937-201ENSMUST00000197908 742 ntBASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Gm9332-201ENSMUST00000198431 730 ntBASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Gm18541-201ENSMUST00000215935 538 ntBASIC5.55□□□□□ -1.52
Vps28Q9D1C8 AC122901.2-201ENSMUST00000216926 285 ntBASIC5.55□□□□□ -1.52
Vps28Q9D1C8 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.55□□□□□ -1.52
Vps28Q9D1C8 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Vps28Q9D1C8 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.55□□□□□ -1.52
Vps28Q9D1C8 CU024892.1-201ENSMUST00000224869 515 ntBASIC5.55□□□□□ -1.52
Vps28Q9D1C8 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Vps28Q9D1C8 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm14786-201ENSMUST00000117127 944 ntBASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm13890-201ENSMUST00000117578 390 ntBASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm11781-201ENSMUST00000118328 472 ntBASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm13537-201ENSMUST00000120467 267 ntBASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm12110-201ENSMUST00000121601 579 ntBASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm22158-201ENSMUST00000158411 126 ntBASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm6872-201ENSMUST00000165001 700 ntBASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm2914-201ENSMUST00000186120 328 ntBASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm28429-201ENSMUST00000188521 363 ntBASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm29664-201ENSMUST00000191125 463 ntBASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm43308-201ENSMUST00000197236 373 ntBASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm44845-201ENSMUST00000208773 335 ntBASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm33601-201ENSMUST00000210001 961 ntBASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm8748-201ENSMUST00000211125 587 ntBASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm8106-201ENSMUST00000213123 523 ntBASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm6362-201ENSMUST00000217686 836 ntBASIC5.54□□□□□ -1.52
Vps28Q9D1C8 AC155922.1-201ENSMUST00000220100 373 ntBASIC5.54□□□□□ -1.52
Vps28Q9D1C8 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 CT009764.1-201ENSMUST00000222260 483 ntBASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm7768-201ENSMUST00000222988 597 ntBASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm22456-201ENSMUST00000082578 125 ntBASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm25810-201ENSMUST00000082752 108 ntBASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms