Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ddx56Q9D0R4 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
Ddx56Q9D0R4 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ddx56Q9D0R4 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Gm11885-201ENSMUST00000118473 1428 ntBASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Gm37639-201ENSMUST00000191623 2785 ntBASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Gm12322-201ENSMUST00000121605 389 ntBASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Gm12494-201ENSMUST00000121684 521 ntBASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Gm22817-201ENSMUST00000157448 356 ntBASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Gm24860-201ENSMUST00000158457 276 ntBASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Gm22650-201ENSMUST00000175138 105 ntBASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Mirt2-201ENSMUST00000175179 285 ntBASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Gm38281-201ENSMUST00000192301 315 ntBASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Ighv1-10-201ENSMUST00000194372 355 ntBASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Gm42474-201ENSMUST00000201073 505 ntBASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Gm42961-201ENSMUST00000202023 181 ntBASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 AC124826.1-201ENSMUST00000221651 325 ntBASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 AC118006.2-201ENSMUST00000224167 962 ntBASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 AC164618.3-201ENSMUST00000224863 681 ntBASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 AC159205.4-201ENSMUST00000225964 704 ntBASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Gm23104-201ENSMUST00000083722 104 ntBASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
Ddx56Q9D0R4 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Gm12193-201ENSMUST00000117250 379 ntBASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Gm14529-201ENSMUST00000117894 406 ntBASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Gm11227-201ENSMUST00000119774 471 ntBASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Gm13593-201ENSMUST00000121329 692 ntBASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Gm25102-201ENSMUST00000122479 112 ntBASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Gm22084-201ENSMUST00000157585 105 ntBASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Gm23896-201ENSMUST00000158109 130 ntBASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Gm27522-201ENSMUST00000183949 230 ntBASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Gm38149-201ENSMUST00000191943 339 ntBASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Gm42886-201ENSMUST00000199214 466 ntBASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Gm5317-201ENSMUST00000204445 847 ntBASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Gm5735-201ENSMUST00000207053 167 ntBASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC6.1□□□□□ -1.43
Ddx56Q9D0R4 Gm45850-201ENSMUST00000212536 338 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms