Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 Gm24300-201ENSMUST00000177809 109 ntBASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 Gm24017-201ENSMUST00000178726 109 ntBASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 Gm23952-201ENSMUST00000179380 109 ntBASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 Mir7046-201ENSMUST00000183435 66 ntBASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 Gm27460-201ENSMUST00000184213 100 ntBASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 Gm28996-201ENSMUST00000190316 721 ntBASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 Gm37436-201ENSMUST00000193842 1085 ntBASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 Mir219c-201ENSMUST00000199860 60 ntBASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 Gm18482-201ENSMUST00000202405 760 ntBASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 Gm43596-201ENSMUST00000202818 884 ntBASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 Gm17988-201ENSMUST00000208796 535 ntBASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 AC105407.3-201ENSMUST00000224161 648 ntBASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 AC107711.2-203ENSMUST00000227827 762 ntBASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 Snord59a-201ENSMUST00000082844 74 ntBASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Cdk5rap3Q99LM2 Gm42535-201ENSMUST00000197312 1399 ntBASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 Gm22266-201ENSMUST00000104011 138 ntBASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 Gm6031-201ENSMUST00000121314 1054 ntBASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 Gm2914-201ENSMUST00000186120 328 ntBASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 Gm29376-201ENSMUST00000189357 835 ntBASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 Gm37710-201ENSMUST00000193501 1274 ntBASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 Gm18009-201ENSMUST00000203239 1016 ntBASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 AC122301.1-201ENSMUST00000219625 507 ntBASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 AC125190.2-201ENSMUST00000221160 497 ntBASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 Gm18954-201ENSMUST00000222200 1792 ntBASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC5.42□□□□□ -1.54
Cdk5rap3Q99LM2 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 AC136019.1-201ENSMUST00000226503 1412 ntBASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Gm15772-201ENSMUST00000118533 438 ntBASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Gm14560-201ENSMUST00000118672 375 ntBASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Gm13367-201ENSMUST00000119955 796 ntBASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Gm14229-201ENSMUST00000121178 850 ntBASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Gm3091-201ENSMUST00000163408 484 ntBASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Gm9294-201ENSMUST00000165198 789 ntBASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Gm27210-201ENSMUST00000184263 402 ntBASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Mir6989-201ENSMUST00000184812 65 ntBASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Gm38011-201ENSMUST00000193312 279 ntBASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Gm42458-201ENSMUST00000201914 369 ntBASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Gm43456-201ENSMUST00000202519 457 ntBASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Gm45249-201ENSMUST00000211021 348 ntBASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Gm45750-201ENSMUST00000211966 354 ntBASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.41□□□□□ -1.54
Cdk5rap3Q99LM2 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 127.9 ms