Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Gm28943-201ENSMUST00000186187 615 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Gm28736-201ENSMUST00000186257 615 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Gm29401-201ENSMUST00000186690 615 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Gm29178-204ENSMUST00000186784 615 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Gm28589-201ENSMUST00000186991 615 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Gm28936-201ENSMUST00000187153 615 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Gm29121-201ENSMUST00000187611 615 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Gm28243-201ENSMUST00000187801 615 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Gm28844-202ENSMUST00000187977 615 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Gm29058-201ENSMUST00000189510 615 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Gm29624-201ENSMUST00000190018 615 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Gm28780-201ENSMUST00000190223 615 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Gm28969-211ENSMUST00000190992 615 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Gm28990-207ENSMUST00000191219 615 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Gm36468-201ENSMUST00000192119 615 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Gm31572-201ENSMUST00000193341 615 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Gm30175-201ENSMUST00000194173 615 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Gm37173-201ENSMUST00000194498 1017 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Gm30858-201ENSMUST00000195516 615 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 AC154450.1-201ENSMUST00000220911 485 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Gm19195-201ENSMUST00000222018 511 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Thoc7-209ENSMUST00000225325 765 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.97□□□□□ -1.45
Cchcr1Q8K2I2 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
Cchcr1Q8K2I2 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
Cchcr1Q8K2I2 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm22468-201ENSMUST00000116680 120 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm26248-201ENSMUST00000116700 121 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm26137-201ENSMUST00000116701 121 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm26190-201ENSMUST00000116704 121 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm24617-201ENSMUST00000116705 121 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm25778-201ENSMUST00000116713 121 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm25774-201ENSMUST00000116717 121 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm22102-201ENSMUST00000116730 121 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm23177-201ENSMUST00000116784 121 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm24193-201ENSMUST00000116801 121 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm24744-201ENSMUST00000116833 121 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm24427-201ENSMUST00000116896 121 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm22346-201ENSMUST00000116918 121 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm23606-201ENSMUST00000116938 121 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm22029-201ENSMUST00000116940 121 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm26298-201ENSMUST00000116956 121 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm23844-201ENSMUST00000116959 121 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm24484-201ENSMUST00000117009 121 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm25347-201ENSMUST00000117026 121 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm22112-201ENSMUST00000117032 121 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm11409-201ENSMUST00000118621 403 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm12704-201ENSMUST00000119789 464 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm17046-201ENSMUST00000168078 850 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm22991-201ENSMUST00000178126 121 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm25754-201ENSMUST00000178653 121 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm22419-201ENSMUST00000178780 121 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm24802-201ENSMUST00000178897 121 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm25208-201ENSMUST00000178964 121 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm24567-201ENSMUST00000179294 121 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm23943-201ENSMUST00000179712 121 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm25228-201ENSMUST00000180121 121 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm23304-201ENSMUST00000180209 121 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Mir7687-201ENSMUST00000184722 59 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm2623-201ENSMUST00000199229 286 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 AC138284.2-201ENSMUST00000213982 567 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm3800-201ENSMUST00000221086 554 ntBASIC5.96□□□□□ -1.46
Cchcr1Q8K2I2 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms