Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Mir6539-201ENSMUST00000183732 110 ntBASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm37173-201ENSMUST00000194498 1017 ntBASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm19921-201ENSMUST00000210505 703 ntBASIC6.52□□□□□ -1.37
Brf1Q8CFK2 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Anxa13-202ENSMUST00000227274 1201 ntBASIC6.52□□□□□ -1.37
Brf1Q8CFK2 CT030238.4-203ENSMUST00000227343 836 ntBASIC6.52□□□□□ -1.37
Brf1Q8CFK2 AC166574.7-201ENSMUST00000228502 704 ntBASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Desi2-202ENSMUST00000069568 1193 ntBASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm45322-201ENSMUST00000211642 1361 ntBASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm43771-201ENSMUST00000202931 1578 ntBASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm38029-201ENSMUST00000192669 2090 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm37569-201ENSMUST00000192111 1722 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm44220-201ENSMUST00000203784 2487 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 AC113031.7-201ENSMUST00000228609 1928 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm38264-201ENSMUST00000194850 2032 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm26146-201ENSMUST00000104478 185 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm14943-201ENSMUST00000118056 546 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm24940-201ENSMUST00000158326 108 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm26169-201ENSMUST00000158420 135 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm22361-201ENSMUST00000158435 176 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm20401-201ENSMUST00000173717 212 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm27854-201ENSMUST00000175578 244 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm22111-201ENSMUST00000178010 79 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm23687-201ENSMUST00000178664 79 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm24566-201ENSMUST00000179286 79 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm23305-201ENSMUST00000179342 79 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm26389-201ENSMUST00000179819 79 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm22130-201ENSMUST00000179979 79 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm22393-201ENSMUST00000180153 79 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm25085-201ENSMUST00000180298 79 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm27409-201ENSMUST00000184727 80 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm29509-201ENSMUST00000185716 321 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm37996-201ENSMUST00000191859 367 ntBASIC6.51□□□□□ -1.37
Brf1Q8CFK2 Gm6057-201ENSMUST00000195927 314 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 105.1 ms