Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm28886-202ENSMUST00000187889 484 ntBASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm28554-202ENSMUST00000189175 484 ntBASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm29213-202ENSMUST00000189703 484 ntBASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm28851-202ENSMUST00000189757 484 ntBASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm28461-201ENSMUST00000190023 484 ntBASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm44319-201ENSMUST00000196974 93 ntBASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm2623-201ENSMUST00000199229 286 ntBASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm34149-201ENSMUST00000203547 304 ntBASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 AC140409.4-201ENSMUST00000215757 538 ntBASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 AC166358.3-201ENSMUST00000221456 181 ntBASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 AC125543.4-201ENSMUST00000223385 117 ntBASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Mir449a-201ENSMUST00000083641 91 ntBASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28aQ8CEI3 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Gm45129-201ENSMUST00000208444 2224 ntBASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Gm15357-201ENSMUST00000119160 285 ntBASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Gm14335-201ENSMUST00000119165 810 ntBASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Gm12074-201ENSMUST00000120189 219 ntBASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Gm13162-201ENSMUST00000121481 454 ntBASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Gm22958-201ENSMUST00000122512 184 ntBASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Klra13-ps-201ENSMUST00000125813 802 ntBASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Gm22383-201ENSMUST00000158188 327 ntBASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Gm24931-201ENSMUST00000158324 107 ntBASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Gm29161-201ENSMUST00000188250 699 ntBASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Gm29284-201ENSMUST00000188363 255 ntBASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Gm18969-201ENSMUST00000189423 730 ntBASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Gm28389-201ENSMUST00000190090 697 ntBASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Gm36991-201ENSMUST00000191800 648 ntBASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Gm20770-201ENSMUST00000193474 694 ntBASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Gm9480-201ENSMUST00000198038 616 ntBASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Gm43968-201ENSMUST00000203388 389 ntBASIC5.2□□□□□ -1.58
Ccdc28aQ8CEI3 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms