Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Ccdc28bQ8CEG5 Gm26063-201ENSMUST00000083378 107 ntBASIC5.1□□□□□ -1.59
Ccdc28bQ8CEG5 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Ccdc28bQ8CEG5 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Ccdc28bQ8CEG5 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5.1□□□□□ -1.59
Ccdc28bQ8CEG5 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.1□□□□□ -1.59
Ccdc28bQ8CEG5 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC5.1□□□□□ -1.59
Ccdc28bQ8CEG5 Gm45378-201ENSMUST00000211063 2711 ntBASIC5.1□□□□□ -1.59
Ccdc28bQ8CEG5 Gm14806-201ENSMUST00000116606 2110 ntBASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Gm18716-201ENSMUST00000204507 1603 ntBASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Gm13690-201ENSMUST00000118989 285 ntBASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Gm14805-201ENSMUST00000120172 340 ntBASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Gm12267-201ENSMUST00000121609 761 ntBASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Gm26490-201ENSMUST00000157879 140 ntBASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Gm28116-201ENSMUST00000189064 387 ntBASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Gm37614-201ENSMUST00000195645 210 ntBASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Mir409-201ENSMUST00000198153 79 ntBASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Gm44374-201ENSMUST00000199821 140 ntBASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Gm18009-201ENSMUST00000203239 1016 ntBASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Gm19596-201ENSMUST00000203685 739 ntBASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Gm44603-201ENSMUST00000206820 367 ntBASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Gm4587-201ENSMUST00000209135 637 ntBASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Gm4803-201ENSMUST00000218729 1279 ntBASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 AC117237.1-201ENSMUST00000224035 395 ntBASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 AC159205.4-201ENSMUST00000225964 704 ntBASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Mir143-201ENSMUST00000083511 63 ntBASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Ccdc28bQ8CEG5 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
Ccdc28bQ8CEG5 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC5.09□□□□□ -1.6
Ccdc28bQ8CEG5 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Ccdc28bQ8CEG5 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm12507-201ENSMUST00000119155 415 ntBASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm13460-201ENSMUST00000121274 353 ntBASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm8761-201ENSMUST00000121507 955 ntBASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm23211-201ENSMUST00000122717 308 ntBASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm25332-201ENSMUST00000158038 105 ntBASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm22636-201ENSMUST00000158142 275 ntBASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Scarna13-201ENSMUST00000158164 275 ntBASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm20530-201ENSMUST00000174261 254 ntBASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm27688-201ENSMUST00000183634 91 ntBASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm2325-201ENSMUST00000186637 581 ntBASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm19060-201ENSMUST00000201959 421 ntBASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm7499-201ENSMUST00000210423 813 ntBASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 AL671874.1-201ENSMUST00000223746 1123 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 131.7 ms