Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC7.58□□□□□ -1.2
Usp40Q8BWR4 AC154755.1-201ENSMUST00000225244 537 ntBASIC7.58□□□□□ -1.2
Usp40Q8BWR4 AC133203.2-201ENSMUST00000226709 464 ntBASIC7.58□□□□□ -1.2
Usp40Q8BWR4 AC099612.2-201ENSMUST00000226824 721 ntBASIC7.58□□□□□ -1.2
Usp40Q8BWR4 AC121960.3-201ENSMUST00000227077 623 ntBASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Usp40Q8BWR4 Gm43360-201ENSMUST00000197656 2887 ntBASIC7.57□□□□□ -1.2
Usp40Q8BWR4 AC159476.1-201ENSMUST00000215914 1668 ntBASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Gm42513-201ENSMUST00000197831 2119 ntBASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Gm15443-201ENSMUST00000118947 820 ntBASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Gm3931-201ENSMUST00000119038 455 ntBASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Gm13991-201ENSMUST00000120190 648 ntBASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Gm25176-201ENSMUST00000122640 125 ntBASIC7.57□□□□□ -1.2
Usp40Q8BWR4 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Scarna13-201ENSMUST00000158164 275 ntBASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Gm3123-201ENSMUST00000163480 480 ntBASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Gm6872-201ENSMUST00000165001 700 ntBASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Gm26970-201ENSMUST00000182990 964 ntBASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Gm27148-201ENSMUST00000185086 160 ntBASIC7.57□□□□□ -1.2
Usp40Q8BWR4 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Gm29072-201ENSMUST00000191149 678 ntBASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Gm43487-201ENSMUST00000200331 1031 ntBASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Gm18611-201ENSMUST00000200334 1118 ntBASIC7.57□□□□□ -1.2
Usp40Q8BWR4 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC7.57□□□□□ -1.2
Usp40Q8BWR4 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
Usp40Q8BWR4 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Gm19233-201ENSMUST00000219772 936 ntBASIC7.57□□□□□ -1.2
Usp40Q8BWR4 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC7.57□□□□□ -1.2
Usp40Q8BWR4 AC158523.2-201ENSMUST00000222708 548 ntBASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Gm11290-204ENSMUST00000224688 3042 ntBASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Usp40Q8BWR4 Gm9923-201ENSMUST00000217785 1836 ntBASIC7.57□□□□□ -1.2
Usp40Q8BWR4 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Gm15090-201ENSMUST00000118787 1196 ntBASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Gm15089-201ENSMUST00000122332 1196 ntBASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Gm8256-201ENSMUST00000169178 453 ntBASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Gm17223-201ENSMUST00000171413 481 ntBASIC7.56□□□□□ -1.2
Usp40Q8BWR4 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Mir6400-201ENSMUST00000184870 92 ntBASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Gm18183-201ENSMUST00000191024 615 ntBASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Gm44988-201ENSMUST00000203835 1161 ntBASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Gm43884-201ENSMUST00000204251 559 ntBASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Gm45215-201ENSMUST00000206407 395 ntBASIC7.56□□□□□ -1.2
Usp40Q8BWR4 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Usp40Q8BWR4 AL590614.1-201ENSMUST00000226037 268 ntBASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Usp40Q8BWR4 AC114916.1-201ENSMUST00000228465 494 ntBASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Gm23514-201ENSMUST00000082827 130 ntBASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Gm25139-201ENSMUST00000083247 210 ntBASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Gm9597-202ENSMUST00000227632 1387 ntBASIC7.56□□□□□ -1.2
Usp40Q8BWR4 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Usp40Q8BWR4 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Usp40Q8BWR4 AC112972.2-201ENSMUST00000228702 2210 ntBASIC7.55□□□□□ -1.2
Usp40Q8BWR4 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Usp40Q8BWR4 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Usp40Q8BWR4 Gm22195-201ENSMUST00000116861 108 ntBASIC7.55□□□□□ -1.2
Usp40Q8BWR4 Gm12225-201ENSMUST00000117995 298 ntBASIC7.55□□□□□ -1.2
Usp40Q8BWR4 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC7.55□□□□□ -1.2
Usp40Q8BWR4 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Usp40Q8BWR4 Gm23317-201ENSMUST00000157999 129 ntBASIC7.55□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms