Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm7312-201ENSMUST00000118798 469 ntBASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Gm12413-201ENSMUST00000121508 312 ntBASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Gm25846-201ENSMUST00000158013 135 ntBASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Gm7152-201ENSMUST00000163570 605 ntBASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Mir3058-201ENSMUST00000175126 91 ntBASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Gm28094-201ENSMUST00000185262 390 ntBASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Gm38131-201ENSMUST00000192449 430 ntBASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Gm37973-201ENSMUST00000195767 1289 ntBASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Gm44845-201ENSMUST00000208773 335 ntBASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Gm20946-201ENSMUST00000212367 461 ntBASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Gm6991-201ENSMUST00000218475 1178 ntBASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Gm22155-201ENSMUST00000083836 162 ntBASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Gm45172-201ENSMUST00000206054 1301 ntBASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Gm37124-201ENSMUST00000192140 1992 ntBASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Gm44801-201ENSMUST00000207644 2060 ntBASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Gm25595-201ENSMUST00000102273 97 ntBASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Gm12936-201ENSMUST00000121439 301 ntBASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Gm22518-201ENSMUST00000158267 68 ntBASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Gm8837-201ENSMUST00000161037 1107 ntBASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Gm28188-201ENSMUST00000190483 236 ntBASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Gm42990-201ENSMUST00000199231 312 ntBASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Gm18330-201ENSMUST00000199246 547 ntBASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Gm3257-201ENSMUST00000207217 675 ntBASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Gm44571-201ENSMUST00000208092 533 ntBASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 AC154634.3-201ENSMUST00000224589 736 ntBASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Zfp429-203ENSMUST00000224684 524 ntBASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 AC154562.1-201ENSMUST00000226140 966 ntBASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 n-R5s204-201ENSMUST00000082972 119 ntBASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC5.51□□□□□ -1.53
Ccdc40Q8BI79 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Ccdc40Q8BI79 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms