Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col8a1Q00780 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col8a1Q00780 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col8a1Q00780 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col8a1Q00780 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col8a1Q00780 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col8a1Q00780 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Col8a1Q00780 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm37124-201ENSMUST00000192140 1992 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col8a1Q00780 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm25943-201ENSMUST00000103791 90 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Mir466b-7-201ENSMUST00000103804 88 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Mir466b-5-201ENSMUST00000103900 88 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm22771-201ENSMUST00000104449 91 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm5073-201ENSMUST00000118222 820 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm13711-201ENSMUST00000119708 453 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm14125-202ENSMUST00000120921 756 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm14589-201ENSMUST00000121640 727 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm23885-201ENSMUST00000122682 294 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col8a1Q00780 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm23050-201ENSMUST00000158775 165 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col8a1Q00780 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col8a1Q00780 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC5.39□□□□□ -1.55
Col8a1Q00780 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm26057-201ENSMUST00000178099 165 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Mir466b-4-201ENSMUST00000178801 90 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm25285-201ENSMUST00000178951 90 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Col8a1Q00780 Mir466b-6-201ENSMUST00000180061 90 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Mir466c-2-201ENSMUST00000180211 90 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm2950-201ENSMUST00000185530 520 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm29389-201ENSMUST00000191562 352 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm6631-201ENSMUST00000193699 559 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Igkv4-83-201ENSMUST00000196933 334 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm43228-201ENSMUST00000200735 264 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm18838-201ENSMUST00000204855 886 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm45343-201ENSMUST00000210452 828 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm45400-201ENSMUST00000211603 653 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm45724-201ENSMUST00000213031 420 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm45739-201ENSMUST00000213094 388 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 AC151843.1-201ENSMUST00000215960 691 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 AC134537.2-201ENSMUST00000217770 575 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 AC116460.1-201ENSMUST00000219040 313 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 AC115750.1-201ENSMUST00000220441 567 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm9292-201ENSMUST00000222008 710 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 AC132317.2-201ENSMUST00000227301 519 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 AC168062.1-201ENSMUST00000228048 769 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col8a1Q00780 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Col8a1Q00780 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Col8a1Q00780 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm26064-201ENSMUST00000083381 109 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC5.39□□□□□ -1.55
Col8a1Q00780 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col8a1Q00780 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Col8a1Q00780 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col8a1Q00780 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col8a1Q00780 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col8a1Q00780 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC5.39□□□□□ -1.55
Col8a1Q00780 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col8a1Q00780 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col8a1Q00780 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col8a1Q00780 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Col8a1Q00780 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm43330-201ENSMUST00000199706 2153 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm43363-201ENSMUST00000201590 2647 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm44676-201ENSMUST00000208520 3055 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col8a1Q00780 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
Col8a1Q00780 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col8a1Q00780 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col8a1Q00780 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col8a1Q00780 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col8a1Q00780 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col8a1Q00780 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col8a1Q00780 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm43613-201ENSMUST00000199409 1613 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 AU020206-202ENSMUST00000206358 3009 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm37725-201ENSMUST00000193965 2125 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms