Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PrkdcP97313 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PrkdcP97313 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PrkdcP97313 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PrkdcP97313 Gm15385-201ENSMUST00000118725 667 ntBASIC3.38□□□□□ -1.87
PrkdcP97313 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC3.38□□□□□ -1.87
PrkdcP97313 Gm6542-201ENSMUST00000153606 772 ntBASIC3.38□□□□□ -1.87
PrkdcP97313 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC3.38□□□□□ -1.87
PrkdcP97313 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC3.38□□□□□ -1.87
PrkdcP97313 Gm45434-201ENSMUST00000210550 293 ntBASIC3.38□□□□□ -1.87
PrkdcP97313 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.38□□□□□ -1.87
PrkdcP97313 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PrkdcP97313 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
PrkdcP97313 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC3.38□□□□□ -1.87
PrkdcP97313 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
PrkdcP97313 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
PrkdcP97313 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
PrkdcP97313 Gm44321-201ENSMUST00000204262 2855 ntBASIC3.38□□□□□ -1.87
PrkdcP97313 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PrkdcP97313 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PrkdcP97313 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
PrkdcP97313 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PrkdcP97313 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PrkdcP97313 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC3.38□□□□□ -1.87
PrkdcP97313 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
PrkdcP97313 Gm4045-201ENSMUST00000204076 310 ntBASIC3.38□□□□□ -1.87
PrkdcP97313 Gm18599-201ENSMUST00000206729 1125 ntBASIC3.38□□□□□ -1.87
PrkdcP97313 AC154592.1-201ENSMUST00000225784 574 ntBASIC3.38□□□□□ -1.87
PrkdcP97313 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PrkdcP97313 n-R5s7-201ENSMUST00000083755 121 ntBASIC3.38□□□□□ -1.87
PrkdcP97313 Nav1-202ENSMUST00000067414 13117 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
PrkdcP97313 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PrkdcP97313 Smc5-206ENSMUST00000226111 3265 ntBASIC3.38□□□□□ -1.87
PrkdcP97313 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PrkdcP97313 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC3.38□□□□□ -1.87
PrkdcP97313 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PrkdcP97313 Olfr484-202ENSMUST00000214722 4676 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
PrkdcP97313 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PrkdcP97313 Srgap2-201ENSMUST00000097588 8026 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
PrkdcP97313 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
PrkdcP97313 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PrkdcP97313 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
PrkdcP97313 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PrkdcP97313 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PrkdcP97313 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PrkdcP97313 Gm25962-201ENSMUST00000157173 168 ntBASIC3.38□□□□□ -1.87
PrkdcP97313 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PrkdcP97313 Gm43559-201ENSMUST00000198755 466 ntBASIC3.38□□□□□ -1.87
PrkdcP97313 Gm44648-201ENSMUST00000208267 329 ntBASIC3.38□□□□□ -1.87
PrkdcP97313 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC3.38□□□□□ -1.87
PrkdcP97313 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.38□□□□□ -1.87
PrkdcP97313 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PrkdcP97313 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PrkdcP97313 Gm43769-201ENSMUST00000201871 4323 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PrkdcP97313 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PrkdcP97313 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PrkdcP97313 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PrkdcP97313 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PrkdcP97313 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC3.37□□□□□ -1.87
PrkdcP97313 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PrkdcP97313 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PrkdcP97313 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PrkdcP97313 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PrkdcP97313 Gm24505-201ENSMUST00000157682 126 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Gm37444-201ENSMUST00000193605 439 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Gm42999-201ENSMUST00000198049 786 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC3.37□□□□□ -1.87
PrkdcP97313 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC3.37□□□□□ -1.87
PrkdcP97313 Gm26330-201ENSMUST00000082817 104 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Gm43485-201ENSMUST00000199292 1710 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PrkdcP97313 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC3.37□□□□□ -1.87
PrkdcP97313 Helz2-202ENSMUST00000108831 10109 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
PrkdcP97313 Gm42955-201ENSMUST00000197355 3393 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PrkdcP97313 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PrkdcP97313 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PrkdcP97313 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
PrkdcP97313 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PrkdcP97313 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC3.37□□□□□ -1.87
PrkdcP97313 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PrkdcP97313 Gm14909-201ENSMUST00000117853 351 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Defa-ps11-201ENSMUST00000119719 299 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Gm12322-201ENSMUST00000121605 389 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC3.37□□□□□ -1.87
PrkdcP97313 Gm25438-201ENSMUST00000158281 110 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Mir6993-201ENSMUST00000184912 65 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC3.37□□□□□ -1.87
PrkdcP97313 Gm43814-201ENSMUST00000197851 413 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Gm44054-201ENSMUST00000203814 372 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PrkdcP97313 Gm18258-201ENSMUST00000210413 542 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Gm7034-201ENSMUST00000218638 645 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Apoo-ps-201ENSMUST00000061241 586 ntBASIC3.37□□□□□ -1.87
PrkdcP97313 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PrkdcP97313 Gm44695-201ENSMUST00000205567 1631 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms