Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Mir129-2-201ENSMUST00000083577 90 ntBASIC5.8□□□□□ -1.48
CiitaP79621 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
CiitaP79621 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CiitaP79621 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
CiitaP79621 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CiitaP79621 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CiitaP79621 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC5.8□□□□□ -1.48
CiitaP79621 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.8□□□□□ -1.48
CiitaP79621 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.8□□□□□ -1.48
CiitaP79621 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CiitaP79621 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CiitaP79621 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CiitaP79621 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.8□□□□□ -1.48
CiitaP79621 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CiitaP79621 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CiitaP79621 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CiitaP79621 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CiitaP79621 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CiitaP79621 Gm11699-201ENSMUST00000119016 401 ntBASIC5.79□□□□□ -1.48
CiitaP79621 Gm13738-201ENSMUST00000122437 469 ntBASIC5.79□□□□□ -1.48
CiitaP79621 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.79□□□□□ -1.48
CiitaP79621 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.79□□□□□ -1.48
CiitaP79621 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CiitaP79621 Gm22588-201ENSMUST00000157510 140 ntBASIC5.79□□□□□ -1.48
CiitaP79621 Gm22764-201ENSMUST00000158370 92 ntBASIC5.79□□□□□ -1.48
CiitaP79621 Gm17907-201ENSMUST00000173150 710 ntBASIC5.79□□□□□ -1.48
CiitaP79621 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.79□□□□□ -1.48
CiitaP79621 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.79□□□□□ -1.48
CiitaP79621 Gm17981-201ENSMUST00000191109 739 ntBASIC5.79□□□□□ -1.48
CiitaP79621 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.79□□□□□ -1.48
CiitaP79621 Mir6994-201ENSMUST00000198985 73 ntBASIC5.79□□□□□ -1.48
CiitaP79621 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.79□□□□□ -1.48
CiitaP79621 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
CiitaP79621 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CiitaP79621 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.79□□□□□ -1.48
CiitaP79621 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CiitaP79621 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC5.79□□□□□ -1.48
CiitaP79621 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.79□□□□□ -1.48
CiitaP79621 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CiitaP79621 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CiitaP79621 n-R5s62-201ENSMUST00000082780 96 ntBASIC5.79□□□□□ -1.48
CiitaP79621 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CiitaP79621 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CiitaP79621 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CiitaP79621 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CiitaP79621 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CiitaP79621 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CiitaP79621 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CiitaP79621 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CiitaP79621 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CiitaP79621 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.79□□□□□ -1.48
CiitaP79621 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CiitaP79621 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CiitaP79621 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CiitaP79621 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CiitaP79621 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CiitaP79621 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CiitaP79621 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CiitaP79621 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.78□□□□□ -1.48
CiitaP79621 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.78□□□□□ -1.48
CiitaP79621 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CiitaP79621 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CiitaP79621 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
CiitaP79621 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.78□□□□□ -1.48
CiitaP79621 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC5.78□□□□□ -1.48
CiitaP79621 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CiitaP79621 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.78□□□□□ -1.48
CiitaP79621 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC5.78□□□□□ -1.48
CiitaP79621 Gm20545-201ENSMUST00000174739 210 ntBASIC5.78□□□□□ -1.48
CiitaP79621 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CiitaP79621 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CiitaP79621 Gm29588-201ENSMUST00000185738 298 ntBASIC5.78□□□□□ -1.48
CiitaP79621 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC5.78□□□□□ -1.48
CiitaP79621 Gm29036-201ENSMUST00000189967 877 ntBASIC5.78□□□□□ -1.48
CiitaP79621 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.78□□□□□ -1.48
CiitaP79621 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC5.78□□□□□ -1.48
CiitaP79621 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.78□□□□□ -1.48
CiitaP79621 AC153840.1-201ENSMUST00000219685 313 ntBASIC5.78□□□□□ -1.48
CiitaP79621 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.78□□□□□ -1.48
CiitaP79621 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.78□□□□□ -1.48
CiitaP79621 CT030662.3-201ENSMUST00000228751 476 ntBASIC5.78□□□□□ -1.48
CiitaP79621 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CiitaP79621 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CiitaP79621 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CiitaP79621 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CiitaP79621 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CiitaP79621 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.78□□□□□ -1.48
CiitaP79621 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CiitaP79621 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CiitaP79621 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CiitaP79621 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CiitaP79621 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.77□□□□□ -1.49
CiitaP79621 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CiitaP79621 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CiitaP79621 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CiitaP79621 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CiitaP79621 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
CiitaP79621 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CiitaP79621 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CiitaP79621 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms