Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC5.16□□□□□ -1.58
HttP42859 Gm18258-201ENSMUST00000210413 542 ntBASIC5.16□□□□□ -1.58
HttP42859 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC5.16□□□□□ -1.58
HttP42859 Gm5548-201ENSMUST00000055878 397 ntBASIC5.16□□□□□ -1.58
HttP42859 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
HttP42859 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HttP42859 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC5.16□□□□□ -1.58
HttP42859 Itsn1-208ENSMUST00000114002 14012 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
HttP42859 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.16□□□□□ -1.58
HttP42859 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HttP42859 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
HttP42859 Gm37914-201ENSMUST00000195317 2679 ntBASIC5.15□□□□□ -1.58
HttP42859 Gm14086-201ENSMUST00000117152 173 ntBASIC5.15□□□□□ -1.58
HttP42859 Amd-ps1-201ENSMUST00000120127 994 ntBASIC5.15□□□□□ -1.58
HttP42859 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HttP42859 Gm43157-201ENSMUST00000198223 412 ntBASIC5.15□□□□□ -1.58
HttP42859 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC5.15□□□□□ -1.58
HttP42859 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
HttP42859 Gm26330-201ENSMUST00000082817 104 ntBASIC5.15□□□□□ -1.58
HttP42859 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
HttP42859 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
HttP42859 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
HttP42859 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HttP42859 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
HttP42859 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC5.15□□□□□ -1.58
HttP42859 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.58
HttP42859 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.15□□□□□ -1.58
HttP42859 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HttP42859 Rreb1-207ENSMUST00000128570 8436 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
HttP42859 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
HttP42859 Ctnnd1-210ENSMUST00000111684 6021 ntTSL 5 BASIC5.15□□□□□ -1.59
HttP42859 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
HttP42859 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
HttP42859 Gm26418-201ENSMUST00000104275 137 ntBASIC5.15□□□□□ -1.59
HttP42859 Gm11369-201ENSMUST00000120812 318 ntBASIC5.15□□□□□ -1.59
HttP42859 Gm22588-201ENSMUST00000157510 140 ntBASIC5.15□□□□□ -1.59
HttP42859 Gm17121-201ENSMUST00000170414 847 ntBASIC5.15□□□□□ -1.59
HttP42859 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HttP42859 Gm20773-201ENSMUST00000178940 681 ntBASIC5.15□□□□□ -1.59
HttP42859 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC5.15□□□□□ -1.59
HttP42859 Gm17222-201ENSMUST00000180135 847 ntBASIC5.15□□□□□ -1.59
HttP42859 Gm5027-201ENSMUST00000206700 375 ntBASIC5.15□□□□□ -1.59
HttP42859 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HttP42859 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HttP42859 Mir338-201ENSMUST00000083666 98 ntBASIC5.15□□□□□ -1.59
HttP42859 Gm36981-201ENSMUST00000192340 4485 ntBASIC5.15□□□□□ -1.59
HttP42859 Gm44901-201ENSMUST00000208157 3977 ntBASIC5.15□□□□□ -1.59
HttP42859 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
HttP42859 Daam1-205ENSMUST00000223272 5835 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
HttP42859 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
HttP42859 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
HttP42859 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC5.15□□□□□ -1.59
HttP42859 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HttP42859 Gm37079-201ENSMUST00000194114 2135 ntBASIC5.15□□□□□ -1.59
HttP42859 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
HttP42859 Gm25376-201ENSMUST00000104340 133 ntBASIC5.14□□□□□ -1.59
HttP42859 Gm14687-201ENSMUST00000120206 363 ntBASIC5.14□□□□□ -1.59
HttP42859 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HttP42859 Gm27249-201ENSMUST00000185049 328 ntBASIC5.14□□□□□ -1.59
HttP42859 Gm27781-201ENSMUST00000185185 92 ntBASIC5.14□□□□□ -1.59
HttP42859 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC5.14□□□□□ -1.59
HttP42859 Gm38011-201ENSMUST00000193312 279 ntBASIC5.14□□□□□ -1.59
HttP42859 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5.14□□□□□ -1.59
HttP42859 Gm7807-201ENSMUST00000212475 578 ntBASIC5.14□□□□□ -1.59
HttP42859 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC5.14□□□□□ -1.59
HttP42859 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HttP42859 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
HttP42859 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
HttP42859 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.14□□□□□ -1.59
HttP42859 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HttP42859 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HttP42859 Gm25572-201ENSMUST00000157527 172 ntBASIC5.14□□□□□ -1.59
HttP42859 Gm23098-201ENSMUST00000157552 299 ntBASIC5.14□□□□□ -1.59
HttP42859 Gm27695-201ENSMUST00000184301 91 ntBASIC5.14□□□□□ -1.59
HttP42859 Gm27818-201ENSMUST00000184536 159 ntBASIC5.14□□□□□ -1.59
HttP42859 Gm19774-201ENSMUST00000190667 114 ntBASIC5.14□□□□□ -1.59
HttP42859 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HttP42859 Gm45870-201ENSMUST00000211269 601 ntBASIC5.14□□□□□ -1.59
HttP42859 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.14□□□□□ -1.59
HttP42859 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HttP42859 Mycbp2-201ENSMUST00000159855 15233 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HttP42859 Adar-203ENSMUST00000107405 5871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HttP42859 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HttP42859 Gm43502-201ENSMUST00000200263 2596 ntBASIC5.14□□□□□ -1.59
HttP42859 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.14□□□□□ -1.59
HttP42859 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.14□□□□□ -1.59
HttP42859 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HttP42859 Gm34294-201ENSMUST00000191912 4263 ntBASIC5.14□□□□□ -1.59
HttP42859 Gm5757-201ENSMUST00000117494 528 ntBASIC5.14□□□□□ -1.59
HttP42859 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC5.14□□□□□ -1.59
HttP42859 AC156832.3-201ENSMUST00000215591 435 ntBASIC5.14□□□□□ -1.59
HttP42859 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC5.14□□□□□ -1.59
HttP42859 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HttP42859 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HttP42859 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HttP42859 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HttP42859 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HttP42859 Baz2a-202ENSMUST00000170054 8372 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
HttP42859 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
HttP42859 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms