Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Sox6P40645 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
Sox6P40645 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Sox6P40645 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Sox6P40645 Gm15073-201ENSMUST00000117432 634 ntBASIC4.84□□□□□ -1.63
Sox6P40645 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC4.84□□□□□ -1.63
Sox6P40645 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Sox6P40645 Gm11677-201ENSMUST00000121349 977 ntBASIC4.84□□□□□ -1.63
Sox6P40645 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC4.84□□□□□ -1.63
Sox6P40645 n-R5s30-201ENSMUST00000122624 122 ntBASIC4.84□□□□□ -1.63
Sox6P40645 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC4.84□□□□□ -1.63
Sox6P40645 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC4.84□□□□□ -1.63
Sox6P40645 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Sox6P40645 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC4.84□□□□□ -1.63
Sox6P40645 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC4.84□□□□□ -1.63
Sox6P40645 Gm24216-201ENSMUST00000158259 117 ntBASIC4.84□□□□□ -1.63
Sox6P40645 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC4.84□□□□□ -1.63
Sox6P40645 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC4.84□□□□□ -1.63
Sox6P40645 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC4.84□□□□□ -1.63
Sox6P40645 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Sox6P40645 Mir6911-201ENSMUST00000184241 69 ntBASIC4.84□□□□□ -1.63
Sox6P40645 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.63
Sox6P40645 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Sox6P40645 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC4.84□□□□□ -1.63
Sox6P40645 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Sox6P40645 Gm43215-201ENSMUST00000199108 252 ntBASIC4.84□□□□□ -1.63
Sox6P40645 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC4.84□□□□□ -1.63
Sox6P40645 Gm18599-201ENSMUST00000206729 1125 ntBASIC4.84□□□□□ -1.63
Sox6P40645 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Sox6P40645 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC4.84□□□□□ -1.63
Sox6P40645 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Sox6P40645 AC122858.1-201ENSMUST00000226212 433 ntBASIC4.84□□□□□ -1.63
Sox6P40645 AC122858.3-201ENSMUST00000226341 740 ntBASIC4.84□□□□□ -1.63
Sox6P40645 AC160120.1-201ENSMUST00000227446 663 ntBASIC4.84□□□□□ -1.63
Sox6P40645 AC122858.1-202ENSMUST00000228290 986 ntBASIC4.84□□□□□ -1.63
Sox6P40645 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Sox6P40645 Olfr1153-201ENSMUST00000052300 957 ntBASIC4.84□□□□□ -1.63
Sox6P40645 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Sox6P40645 Rybp-ps-201ENSMUST00000069489 681 ntBASIC4.84□□□□□ -1.63
Sox6P40645 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Sox6P40645 Mir218-2-201ENSMUST00000083649 110 ntBASIC4.84□□□□□ -1.63
Sox6P40645 Mir331-201ENSMUST00000083673 96 ntBASIC4.84□□□□□ -1.63
Sox6P40645 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Sox6P40645 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Sox6P40645 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Sox6P40645 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Sox6P40645 Gm20287-201ENSMUST00000172848 2367 ntBASIC4.84□□□□□ -1.64
Sox6P40645 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
Sox6P40645 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Sox6P40645 Gm19666-201ENSMUST00000198176 1893 ntBASIC4.83□□□□□ -1.64
Sox6P40645 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sox6P40645 Gm18954-201ENSMUST00000222200 1792 ntBASIC4.83□□□□□ -1.64
Sox6P40645 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sox6P40645 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sox6P40645 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sox6P40645 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC4.83□□□□□ -1.64
Sox6P40645 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
Sox6P40645 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC4.83□□□□□ -1.64
Sox6P40645 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sox6P40645 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC4.83□□□□□ -1.64
Sox6P40645 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sox6P40645 Gm14836-201ENSMUST00000118567 471 ntBASIC4.83□□□□□ -1.64
Sox6P40645 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC4.83□□□□□ -1.64
Sox6P40645 Gm12074-201ENSMUST00000120189 219 ntBASIC4.83□□□□□ -1.64
Sox6P40645 Gm8061-201ENSMUST00000122380 350 ntBASIC4.83□□□□□ -1.64
Sox6P40645 Gm23211-201ENSMUST00000122717 308 ntBASIC4.83□□□□□ -1.64
Sox6P40645 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC4.83□□□□□ -1.64
Sox6P40645 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sox6P40645 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sox6P40645 Mir1970-201ENSMUST00000157839 104 ntBASIC4.83□□□□□ -1.64
Sox6P40645 Gm24175-201ENSMUST00000158931 129 ntBASIC4.83□□□□□ -1.64
Sox6P40645 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sox6P40645 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sox6P40645 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Sox6P40645 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sox6P40645 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC4.83□□□□□ -1.64
Sox6P40645 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC4.83□□□□□ -1.64
Sox6P40645 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC4.83□□□□□ -1.64
Sox6P40645 Mir7008-201ENSMUST00000184398 63 ntBASIC4.83□□□□□ -1.64
Sox6P40645 Mir7687-201ENSMUST00000184722 59 ntBASIC4.83□□□□□ -1.64
Sox6P40645 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sox6P40645 Gm44261-201ENSMUST00000203337 209 ntBASIC4.83□□□□□ -1.64
Sox6P40645 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC4.83□□□□□ -1.64
Sox6P40645 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC4.83□□□□□ -1.64
Sox6P40645 Gm8189-203ENSMUST00000211159 1225 ntBASIC4.83□□□□□ -1.64
Sox6P40645 Gm45874-201ENSMUST00000212423 346 ntBASIC4.83□□□□□ -1.64
Sox6P40645 AC183268.2-201ENSMUST00000214513 446 ntBASIC4.83□□□□□ -1.64
Sox6P40645 Gm6906-201ENSMUST00000218014 569 ntBASIC4.83□□□□□ -1.64
Sox6P40645 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC4.83□□□□□ -1.64
Sox6P40645 AL671874.1-201ENSMUST00000223746 1123 ntBASIC4.83□□□□□ -1.64
Sox6P40645 AC161609.1-201ENSMUST00000225878 474 ntBASIC4.83□□□□□ -1.64
Sox6P40645 AC164295.2-201ENSMUST00000228539 757 ntBASIC4.83□□□□□ -1.64
Sox6P40645 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sox6P40645 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Sox6P40645 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sox6P40645 Gm23302-201ENSMUST00000082710 100 ntBASIC4.83□□□□□ -1.64
Sox6P40645 Mir133b-201ENSMUST00000083546 119 ntBASIC4.83□□□□□ -1.64
Sox6P40645 n-R5s46-201ENSMUST00000083960 116 ntBASIC4.83□□□□□ -1.64
Sox6P40645 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sox6P40645 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms