Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
Traf1P39428 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Traf1P39428 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Traf1P39428 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Traf1P39428 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Traf1P39428 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Traf1P39428 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Traf1P39428 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Traf1P39428 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Traf1P39428 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Traf1P39428 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Traf1P39428 Gm7529-201ENSMUST00000213753 1897 ntBASIC6.2□□□□□ -1.42
Traf1P39428 Gm35629-201ENSMUST00000209684 2241 ntBASIC6.2□□□□□ -1.42
Traf1P39428 Gm26300-201ENSMUST00000102282 94 ntBASIC6.2□□□□□ -1.42
Traf1P39428 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC6.2□□□□□ -1.42
Traf1P39428 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC6.2□□□□□ -1.42
Traf1P39428 Gm6542-201ENSMUST00000153606 772 ntBASIC6.2□□□□□ -1.42
Traf1P39428 Gm20397-201ENSMUST00000174520 362 ntBASIC6.2□□□□□ -1.42
Traf1P39428 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC6.2□□□□□ -1.42
Traf1P39428 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Traf1P39428 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC6.2□□□□□ -1.42
Traf1P39428 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC6.2□□□□□ -1.42
Traf1P39428 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC6.2□□□□□ -1.42
Traf1P39428 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC6.2□□□□□ -1.42
Traf1P39428 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC6.2□□□□□ -1.42
Traf1P39428 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC6.2□□□□□ -1.42
Traf1P39428 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC6.2□□□□□ -1.42
Traf1P39428 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC6.2□□□□□ -1.42
Traf1P39428 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC6.2□□□□□ -1.42
Traf1P39428 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC6.2□□□□□ -1.42
Traf1P39428 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC6.2□□□□□ -1.42
Traf1P39428 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Traf1P39428 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC6.2□□□□□ -1.42
Traf1P39428 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC6.2□□□□□ -1.42
Traf1P39428 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC6.2□□□□□ -1.42
Traf1P39428 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC6.2□□□□□ -1.42
Traf1P39428 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC6.2□□□□□ -1.42
Traf1P39428 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC6.2□□□□□ -1.42
Traf1P39428 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC6.2□□□□□ -1.42
Traf1P39428 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC6.2□□□□□ -1.42
Traf1P39428 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC6.2□□□□□ -1.42
Traf1P39428 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC6.2□□□□□ -1.42
Traf1P39428 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC6.2□□□□□ -1.42
Traf1P39428 Gm6057-201ENSMUST00000195927 314 ntBASIC6.2□□□□□ -1.42
Traf1P39428 Gm9173-201ENSMUST00000198054 400 ntBASIC6.2□□□□□ -1.42
Traf1P39428 Gm43717-201ENSMUST00000198684 310 ntBASIC6.2□□□□□ -1.42
Traf1P39428 Gm44603-201ENSMUST00000206820 367 ntBASIC6.2□□□□□ -1.42
Traf1P39428 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Traf1P39428 Gm45722-201ENSMUST00000213075 466 ntBASIC6.2□□□□□ -1.42
Traf1P39428 AC156950.1-201ENSMUST00000219604 456 ntBASIC6.2□□□□□ -1.42
Traf1P39428 AC121947.1-201ENSMUST00000221755 1145 ntBASIC6.2□□□□□ -1.42
Traf1P39428 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC6.2□□□□□ -1.42
Traf1P39428 AC156576.2-202ENSMUST00000222525 411 ntBASIC6.2□□□□□ -1.42
Traf1P39428 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Traf1P39428 AC154436.2-201ENSMUST00000227408 208 ntBASIC6.2□□□□□ -1.42
Traf1P39428 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Traf1P39428 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Traf1P39428 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Traf1P39428 Mir129-1-201ENSMUST00000083535 73 ntBASIC6.2□□□□□ -1.42
Traf1P39428 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Traf1P39428 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Traf1P39428 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Traf1P39428 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Traf1P39428 Gm37051-201ENSMUST00000194535 2943 ntBASIC6.2□□□□□ -1.42
Traf1P39428 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC6.2□□□□□ -1.42
Traf1P39428 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Traf1P39428 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Traf1P39428 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC6.19□□□□□ -1.42
Traf1P39428 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Traf1P39428 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Traf1P39428 Gm9077-201ENSMUST00000210657 2298 ntBASIC6.19□□□□□ -1.42
Traf1P39428 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Traf1P39428 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Traf1P39428 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Traf1P39428 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Traf1P39428 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Traf1P39428 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Traf1P39428 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC6.19□□□□□ -1.42
Traf1P39428 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC6.19□□□□□ -1.42
Traf1P39428 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Traf1P39428 Scarna6-201ENSMUST00000158656 265 ntBASIC6.19□□□□□ -1.42
Traf1P39428 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Traf1P39428 Gm17091-201ENSMUST00000163248 357 ntBASIC6.19□□□□□ -1.42
Traf1P39428 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC6.19□□□□□ -1.42
Traf1P39428 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Traf1P39428 Gm37073-201ENSMUST00000192469 1222 ntBASIC6.19□□□□□ -1.42
Traf1P39428 Gm37421-201ENSMUST00000193088 132 ntBASIC6.19□□□□□ -1.42
Traf1P39428 Gm29813-201ENSMUST00000195856 447 ntBASIC6.19□□□□□ -1.42
Traf1P39428 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Traf1P39428 Gm43629-201ENSMUST00000201782 704 ntBASIC6.19□□□□□ -1.42
Traf1P39428 Gm45215-201ENSMUST00000206407 395 ntBASIC6.19□□□□□ -1.42
Traf1P39428 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC6.19□□□□□ -1.42
Traf1P39428 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC6.19□□□□□ -1.42
Traf1P39428 Gm45908-201ENSMUST00000212977 1177 ntBASIC6.19□□□□□ -1.42
Traf1P39428 Gm7588-201ENSMUST00000216866 571 ntBASIC6.19□□□□□ -1.42
Traf1P39428 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Traf1P39428 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Traf1P39428 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Traf1P39428 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Traf1P39428 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms