Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm26300-201ENSMUST00000102282 94 ntBASIC5.42□□□□□ -1.54
TnfP06804 Gm24160-201ENSMUST00000104594 126 ntBASIC5.42□□□□□ -1.54
TnfP06804 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
TnfP06804 Gm11346-201ENSMUST00000118346 704 ntBASIC5.42□□□□□ -1.54
TnfP06804 Gm13213-201ENSMUST00000119668 474 ntBASIC5.42□□□□□ -1.54
TnfP06804 Gm12287-201ENSMUST00000119770 707 ntBASIC5.42□□□□□ -1.54
TnfP06804 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC5.42□□□□□ -1.54
TnfP06804 Gm15275-201ENSMUST00000154752 347 ntBASIC5.42□□□□□ -1.54
TnfP06804 Mir1946b-201ENSMUST00000157853 133 ntBASIC5.42□□□□□ -1.54
TnfP06804 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
TnfP06804 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC5.42□□□□□ -1.54
TnfP06804 Gm9442-201ENSMUST00000194242 319 ntBASIC5.42□□□□□ -1.54
TnfP06804 Gm5842-201ENSMUST00000195073 622 ntBASIC5.42□□□□□ -1.54
TnfP06804 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.42□□□□□ -1.54
TnfP06804 Gm7333-201ENSMUST00000213449 1060 ntBASIC5.42□□□□□ -1.54
TnfP06804 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.42□□□□□ -1.54
TnfP06804 Gm19936-201ENSMUST00000216414 838 ntBASIC5.42□□□□□ -1.54
TnfP06804 AC127279.1-201ENSMUST00000220140 637 ntBASIC5.42□□□□□ -1.54
TnfP06804 AC132121.1-201ENSMUST00000220774 332 ntBASIC5.42□□□□□ -1.54
TnfP06804 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.42□□□□□ -1.54
TnfP06804 AC211878.2-201ENSMUST00000222486 488 ntBASIC5.42□□□□□ -1.54
TnfP06804 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.42□□□□□ -1.54
TnfP06804 Gm26330-201ENSMUST00000082817 104 ntBASIC5.42□□□□□ -1.54
TnfP06804 Snora30-201ENSMUST00000083325 130 ntBASIC5.42□□□□□ -1.54
TnfP06804 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
TnfP06804 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
TnfP06804 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.42□□□□□ -1.54
TnfP06804 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
TnfP06804 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TnfP06804 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.41□□□□□ -1.54
TnfP06804 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TnfP06804 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TnfP06804 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
TnfP06804 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.41□□□□□ -1.54
TnfP06804 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TnfP06804 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TnfP06804 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TnfP06804 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TnfP06804 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TnfP06804 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TnfP06804 Gm25419-201ENSMUST00000104215 191 ntBASIC5.41□□□□□ -1.54
TnfP06804 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TnfP06804 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
TnfP06804 Gm14560-201ENSMUST00000118672 375 ntBASIC5.41□□□□□ -1.54
TnfP06804 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.41□□□□□ -1.54
TnfP06804 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.41□□□□□ -1.54
TnfP06804 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TnfP06804 Gm9499-201ENSMUST00000180888 964 ntBASIC5.41□□□□□ -1.54
TnfP06804 Gm27528-201ENSMUST00000183544 205 ntBASIC5.41□□□□□ -1.54
TnfP06804 Mir6416-201ENSMUST00000183664 117 ntBASIC5.41□□□□□ -1.54
TnfP06804 Gm43418-201ENSMUST00000201334 428 ntBASIC5.41□□□□□ -1.54
TnfP06804 Gm6850-201ENSMUST00000210031 530 ntBASIC5.41□□□□□ -1.54
TnfP06804 Gm17999-201ENSMUST00000211568 542 ntBASIC5.41□□□□□ -1.54
TnfP06804 Gm45722-201ENSMUST00000213075 466 ntBASIC5.41□□□□□ -1.54
TnfP06804 AC171206.1-201ENSMUST00000213612 213 ntBASIC5.41□□□□□ -1.54
TnfP06804 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC5.41□□□□□ -1.54
TnfP06804 Gm5457-201ENSMUST00000022260 333 ntBASIC5.41□□□□□ -1.54
TnfP06804 CT025525.4-201ENSMUST00000227728 277 ntBASIC5.41□□□□□ -1.54
TnfP06804 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.41□□□□□ -1.54
TnfP06804 AC125539.2-201ENSMUST00000228339 753 ntBASIC5.41□□□□□ -1.54
TnfP06804 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.41□□□□□ -1.54
TnfP06804 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
TnfP06804 Gm7808-201ENSMUST00000082002 387 ntBASIC5.41□□□□□ -1.54
TnfP06804 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
TnfP06804 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TnfP06804 Gm42520-201ENSMUST00000199642 1502 ntBASIC5.41□□□□□ -1.54
TnfP06804 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.41□□□□□ -1.54
TnfP06804 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TnfP06804 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TnfP06804 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TnfP06804 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.41□□□□□ -1.54
TnfP06804 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TnfP06804 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
TnfP06804 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TnfP06804 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TnfP06804 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TnfP06804 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.4□□□□□ -1.54
TnfP06804 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.4□□□□□ -1.54
TnfP06804 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
TnfP06804 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
TnfP06804 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TnfP06804 Gm36963-201ENSMUST00000193506 2324 ntBASIC5.4□□□□□ -1.54
TnfP06804 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
TnfP06804 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TnfP06804 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TnfP06804 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TnfP06804 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.54
TnfP06804 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TnfP06804 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TnfP06804 Gm14086-201ENSMUST00000117152 173 ntBASIC5.4□□□□□ -1.54
TnfP06804 Gm12131-201ENSMUST00000117479 359 ntBASIC5.4□□□□□ -1.54
TnfP06804 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC5.4□□□□□ -1.54
TnfP06804 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
TnfP06804 Gm11790-201ENSMUST00000119569 455 ntBASIC5.4□□□□□ -1.54
TnfP06804 Gm11761-201ENSMUST00000121392 445 ntBASIC5.4□□□□□ -1.54
TnfP06804 Gm22870-201ENSMUST00000157501 112 ntBASIC5.4□□□□□ -1.54
TnfP06804 Gm26310-201ENSMUST00000157766 117 ntBASIC5.4□□□□□ -1.54
TnfP06804 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TnfP06804 Gm8214-201ENSMUST00000172123 351 ntBASIC5.4□□□□□ -1.54
TnfP06804 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 200.6 ms