Protein–RNA interactions for Protein: O35185

Bhlhe40, Class E basic helix-loop-helix protein 40, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe40O35185 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
Bhlhe40O35185 Mir20a-201ENSMUST00000083508 107 ntBASIC5.06□□□□□ -1.6
Bhlhe40O35185 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Bhlhe40O35185 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Bhlhe40O35185 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Bhlhe40O35185 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
Bhlhe40O35185 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Bhlhe40O35185 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Bhlhe40O35185 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Bhlhe40O35185 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Bhlhe40O35185 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.05□□□□□ -1.6
Bhlhe40O35185 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Bhlhe40O35185 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Bhlhe40O35185 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Bhlhe40O35185 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
Bhlhe40O35185 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Bhlhe40O35185 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
Bhlhe40O35185 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Bhlhe40O35185 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Bhlhe40O35185 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Bhlhe40O35185 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Bhlhe40O35185 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Bhlhe40O35185 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Bhlhe40O35185 Gm24578-201ENSMUST00000103970 129 ntBASIC5.05□□□□□ -1.6
Bhlhe40O35185 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.05□□□□□ -1.6
Bhlhe40O35185 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.05□□□□□ -1.6
Bhlhe40O35185 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.05□□□□□ -1.6
Bhlhe40O35185 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.05□□□□□ -1.6
Bhlhe40O35185 Mir1946b-201ENSMUST00000157853 133 ntBASIC5.05□□□□□ -1.6
Bhlhe40O35185 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC5.05□□□□□ -1.6
Bhlhe40O35185 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Bhlhe40O35185 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Bhlhe40O35185 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Bhlhe40O35185 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Bhlhe40O35185 Gm27528-201ENSMUST00000183544 205 ntBASIC5.05□□□□□ -1.6
Bhlhe40O35185 Mir7056-201ENSMUST00000183776 59 ntBASIC5.05□□□□□ -1.6
Bhlhe40O35185 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.05□□□□□ -1.6
Bhlhe40O35185 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Bhlhe40O35185 Gm37070-201ENSMUST00000193272 460 ntBASIC5.05□□□□□ -1.6
Bhlhe40O35185 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.05□□□□□ -1.6
Bhlhe40O35185 Gm42814-201ENSMUST00000199370 460 ntBASIC5.05□□□□□ -1.6
Bhlhe40O35185 Gm32453-201ENSMUST00000204183 456 ntBASIC5.05□□□□□ -1.6
Bhlhe40O35185 Gm2607-201ENSMUST00000212389 627 ntBASIC5.05□□□□□ -1.6
Bhlhe40O35185 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.05□□□□□ -1.6
Bhlhe40O35185 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC5.05□□□□□ -1.6
Bhlhe40O35185 Prl7a1-203ENSMUST00000224852 1283 ntBASIC5.05□□□□□ -1.6
Bhlhe40O35185 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Bhlhe40O35185 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Bhlhe40O35185 Gm23796-201ENSMUST00000084011 160 ntBASIC5.05□□□□□ -1.6
Bhlhe40O35185 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Bhlhe40O35185 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Bhlhe40O35185 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.05□□□□□ -1.6
Bhlhe40O35185 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Bhlhe40O35185 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Bhlhe40O35185 Gm44739-201ENSMUST00000205294 1426 ntBASIC5.05□□□□□ -1.6
Bhlhe40O35185 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Bhlhe40O35185 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Bhlhe40O35185 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Bhlhe40O35185 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.05□□□□□ -1.6
Bhlhe40O35185 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.05□□□□□ -1.6
Bhlhe40O35185 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.04□□□□□ -1.6
Bhlhe40O35185 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Bhlhe40O35185 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Bhlhe40O35185 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Bhlhe40O35185 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Bhlhe40O35185 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Bhlhe40O35185 AC170999.1-201ENSMUST00000226359 1585 ntBASIC5.04□□□□□ -1.6
Bhlhe40O35185 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Bhlhe40O35185 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Bhlhe40O35185 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Bhlhe40O35185 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.04□□□□□ -1.6
Bhlhe40O35185 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Bhlhe40O35185 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Bhlhe40O35185 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Bhlhe40O35185 Gm11486-201ENSMUST00000107322 478 ntBASIC5.04□□□□□ -1.6
Bhlhe40O35185 Gm15670-201ENSMUST00000117740 447 ntBASIC5.04□□□□□ -1.6
Bhlhe40O35185 Gm14046-201ENSMUST00000119389 509 ntBASIC5.04□□□□□ -1.6
Bhlhe40O35185 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.04□□□□□ -1.6
Bhlhe40O35185 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.04□□□□□ -1.6
Bhlhe40O35185 Gm12854-201ENSMUST00000128518 297 ntBASIC5.04□□□□□ -1.6
Bhlhe40O35185 Gm16060-201ENSMUST00000153140 478 ntBASIC5.04□□□□□ -1.6
Bhlhe40O35185 Gm22870-201ENSMUST00000157501 112 ntBASIC5.04□□□□□ -1.6
Bhlhe40O35185 Gm26350-201ENSMUST00000157531 288 ntBASIC5.04□□□□□ -1.6
Bhlhe40O35185 Gm6673-201ENSMUST00000166114 700 ntBASIC5.04□□□□□ -1.6
Bhlhe40O35185 Gm27781-201ENSMUST00000185185 92 ntBASIC5.04□□□□□ -1.6
Bhlhe40O35185 Gm6717-201ENSMUST00000185549 838 ntBASIC5.04□□□□□ -1.6
Bhlhe40O35185 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Bhlhe40O35185 Gm5511-201ENSMUST00000189380 802 ntBASIC5.04□□□□□ -1.6
Bhlhe40O35185 Gm37503-201ENSMUST00000192088 319 ntBASIC5.04□□□□□ -1.6
Bhlhe40O35185 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC5.04□□□□□ -1.6
Bhlhe40O35185 Gm42581-201ENSMUST00000201774 966 ntBASIC5.04□□□□□ -1.6
Bhlhe40O35185 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.04□□□□□ -1.6
Bhlhe40O35185 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Bhlhe40O35185 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Bhlhe40O35185 Gm8137-201ENSMUST00000218997 463 ntBASIC5.04□□□□□ -1.6
Bhlhe40O35185 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.04□□□□□ -1.6
Bhlhe40O35185 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Bhlhe40O35185 AC156576.2-202ENSMUST00000222525 411 ntBASIC5.04□□□□□ -1.6
Bhlhe40O35185 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.04□□□□□ -1.6
Bhlhe40O35185 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms