Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Ccdc180J3QNE4 AC109180.1-201ENSMUST00000218676 398 ntBASIC9.33□□□□□ -0.92
Ccdc180J3QNE4 Gm19786-201ENSMUST00000222589 580 ntBASIC9.33□□□□□ -0.92
Ccdc180J3QNE4 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Ccdc180J3QNE4 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC9.33□□□□□ -0.92
Ccdc180J3QNE4 Gm5746-201ENSMUST00000183550 2200 ntBASIC9.33□□□□□ -0.92
Ccdc180J3QNE4 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC9.33□□□□□ -0.92
Ccdc180J3QNE4 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Ccdc180J3QNE4 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Ccdc180J3QNE4 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ccdc180J3QNE4 Gm36963-201ENSMUST00000193506 2324 ntBASIC9.33□□□□□ -0.92
Ccdc180J3QNE4 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Ccdc180J3QNE4 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC9.32□□□□□ -0.92
Ccdc180J3QNE4 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC9.32□□□□□ -0.92
Ccdc180J3QNE4 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC9.32□□□□□ -0.92
Ccdc180J3QNE4 Gm16456-201ENSMUST00000174431 920 ntBASIC9.32□□□□□ -0.92
Ccdc180J3QNE4 Gm9134-201ENSMUST00000193186 551 ntBASIC9.32□□□□□ -0.92
Ccdc180J3QNE4 Gm37836-201ENSMUST00000195875 175 ntBASIC9.32□□□□□ -0.92
Ccdc180J3QNE4 Gm32308-201ENSMUST00000203053 280 ntBASIC9.32□□□□□ -0.92
Ccdc180J3QNE4 Gm44138-201ENSMUST00000204939 271 ntBASIC9.32□□□□□ -0.92
Ccdc180J3QNE4 Gm8672-201ENSMUST00000221200 332 ntBASIC9.32□□□□□ -0.92
Ccdc180J3QNE4 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Ccdc180J3QNE4 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Ccdc180J3QNE4 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Ccdc180J3QNE4 Gm12285-201ENSMUST00000117347 233 ntBASIC9.32□□□□□ -0.92
Ccdc180J3QNE4 Gm37961-201ENSMUST00000192729 299 ntBASIC9.32□□□□□ -0.92
Ccdc180J3QNE4 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC9.32□□□□□ -0.92
Ccdc180J3QNE4 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC9.32□□□□□ -0.92
Ccdc180J3QNE4 Gm45819-201ENSMUST00000210940 1751 ntBASIC9.32□□□□□ -0.92
Ccdc180J3QNE4 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC9.32□□□□□ -0.92
Ccdc180J3QNE4 Gm5750-201ENSMUST00000218711 801 ntBASIC9.32□□□□□ -0.92
Ccdc180J3QNE4 AC121912.1-201ENSMUST00000227525 1201 ntBASIC9.32□□□□□ -0.92
Ccdc180J3QNE4 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ccdc180J3QNE4 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ccdc180J3QNE4 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Ccdc180J3QNE4 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Ccdc180J3QNE4 CT030159.1-201ENSMUST00000221580 2261 ntBASIC9.31□□□□□ -0.92
Ccdc180J3QNE4 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Ccdc180J3QNE4 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Ccdc180J3QNE4 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Ccdc180J3QNE4 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Ccdc180J3QNE4 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Ccdc180J3QNE4 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC9.31□□□□□ -0.92
Ccdc180J3QNE4 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC9.31□□□□□ -0.92
Ccdc180J3QNE4 Gm43363-201ENSMUST00000201590 2647 ntBASIC9.31□□□□□ -0.92
Ccdc180J3QNE4 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Ccdc180J3QNE4 Gm29086-201ENSMUST00000186774 222 ntBASIC9.31□□□□□ -0.92
Ccdc180J3QNE4 Gm29085-201ENSMUST00000187108 225 ntBASIC9.31□□□□□ -0.92
Ccdc180J3QNE4 Gm45236-201ENSMUST00000208632 229 ntBASIC9.31□□□□□ -0.92
Ccdc180J3QNE4 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC9.31□□□□□ -0.92
Ccdc180J3QNE4 Gm43490-201ENSMUST00000197593 2652 ntBASIC9.31□□□□□ -0.92
Ccdc180J3QNE4 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Ccdc180J3QNE4 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ccdc180J3QNE4 AC123705.3-201ENSMUST00000223531 2069 ntBASIC9.3□□□□□ -0.92
Ccdc180J3QNE4 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC9.3□□□□□ -0.92
Ccdc180J3QNE4 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Ccdc180J3QNE4 Gm24113-201ENSMUST00000157477 276 ntBASIC9.3□□□□□ -0.92
Ccdc180J3QNE4 Gm23906-201ENSMUST00000157573 128 ntBASIC9.3□□□□□ -0.92
Ccdc180J3QNE4 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Ccdc180J3QNE4 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Ccdc180J3QNE4 Gm10048-201ENSMUST00000194196 372 ntBASIC9.3□□□□□ -0.92
Ccdc180J3QNE4 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC9.3□□□□□ -0.92
Ccdc180J3QNE4 AC137127.3-201ENSMUST00000213340 349 ntBASIC9.3□□□□□ -0.92
Ccdc180J3QNE4 CT025689.2-201ENSMUST00000224979 429 ntBASIC9.3□□□□□ -0.92
Ccdc180J3QNE4 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Ccdc180J3QNE4 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Ccdc180J3QNE4 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Ccdc180J3QNE4 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC9.3□□□□□ -0.92
Ccdc180J3QNE4 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ccdc180J3QNE4 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Ccdc180J3QNE4 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ccdc180J3QNE4 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ccdc180J3QNE4 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Ccdc180J3QNE4 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Ccdc180J3QNE4 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Ccdc180J3QNE4 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Ccdc180J3QNE4 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Ccdc180J3QNE4 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccdc180J3QNE4 n-R5s21-201ENSMUST00000122692 117 ntBASIC9.29□□□□□ -0.92
Ccdc180J3QNE4 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ccdc180J3QNE4 Gm23023-201ENSMUST00000158767 109 ntBASIC9.29□□□□□ -0.92
Ccdc180J3QNE4 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
Ccdc180J3QNE4 Gm37632-201ENSMUST00000191811 1142 ntBASIC9.29□□□□□ -0.92
Ccdc180J3QNE4 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC9.29□□□□□ -0.92
Ccdc180J3QNE4 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Ccdc180J3QNE4 Gm45635-201ENSMUST00000211516 2134 ntBASIC9.29□□□□□ -0.92
Ccdc180J3QNE4 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC9.29□□□□□ -0.92
Ccdc180J3QNE4 Gm37033-201ENSMUST00000193199 7350 ntBASIC9.29□□□□□ -0.92
Ccdc180J3QNE4 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC9.29□□□□□ -0.92
Ccdc180J3QNE4 Gm37767-201ENSMUST00000193239 1834 ntBASIC9.29□□□□□ -0.92
Ccdc180J3QNE4 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccdc180J3QNE4 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ccdc180J3QNE4 AC139218.1-201ENSMUST00000228215 4287 ntBASIC9.29□□□□□ -0.92
Ccdc180J3QNE4 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Ccdc180J3QNE4 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Ccdc180J3QNE4 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Ccdc180J3QNE4 Gm13745-201ENSMUST00000121994 527 ntBASIC9.29□□□□□ -0.92
Ccdc180J3QNE4 Gm27037-201ENSMUST00000182270 960 ntBASIC9.29□□□□□ -0.92
Ccdc180J3QNE4 Gm43136-201ENSMUST00000200403 636 ntBASIC9.29□□□□□ -0.92
Ccdc180J3QNE4 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms