Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm8367-201ENSMUST00000186145 887 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm21803-201ENSMUST00000188897 693 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm28567-201ENSMUST00000190270 693 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm37044-201ENSMUST00000193531 693 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm38369-201ENSMUST00000195101 693 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm19089-201ENSMUST00000197207 613 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Ighv1-68-201ENSMUST00000198789 294 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm43561-201ENSMUST00000199866 448 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm8479-201ENSMUST00000203825 718 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm46192-201ENSMUST00000217894 326 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 AC124489.3-201ENSMUST00000224037 278 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 AC105407.1-201ENSMUST00000225684 614 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm25005-201ENSMUST00000083812 156 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm37056-201ENSMUST00000192141 1865 ntBASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim11Q99PQ2 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 AC125328.1-201ENSMUST00000226812 2265 ntBASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Gm19136-201ENSMUST00000190706 2067 ntBASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Gm15108-201ENSMUST00000116160 803 ntBASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Gm12268-201ENSMUST00000118398 442 ntBASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Gm12222-201ENSMUST00000121368 260 ntBASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Gm12332-201ENSMUST00000121397 922 ntBASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Gm14766-201ENSMUST00000121689 367 ntBASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Gm4789-201ENSMUST00000121708 1216 ntBASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Gm25979-201ENSMUST00000157177 138 ntBASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Gm25374-201ENSMUST00000158158 101 ntBASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Gm23149-201ENSMUST00000158837 230 ntBASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Gm29550-201ENSMUST00000185543 285 ntBASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Ighv1-45-201ENSMUST00000193677 352 ntBASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Gm7626-201ENSMUST00000195801 353 ntBASIC7.12□□□□□ -1.27
Trim11Q99PQ2 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Gm43744-201ENSMUST00000196387 688 ntBASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Mir6375-201ENSMUST00000197176 95 ntBASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Gm42896-201ENSMUST00000201249 1113 ntBASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Gm44075-201ENSMUST00000204208 216 ntBASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Gm18600-201ENSMUST00000207205 505 ntBASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Gm2099-201ENSMUST00000220979 412 ntBASIC7.12□□□□□ -1.27
Trim11Q99PQ2 AC124489.2-201ENSMUST00000223930 589 ntBASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim11Q99PQ2 AC164297.2-201ENSMUST00000224388 1508 ntBASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim11Q99PQ2 AC154841.1-201ENSMUST00000227263 1479 ntBASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 108.4 ms