Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm14349-201ENSMUST00000137155 902 ntBASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Gm26162-201ENSMUST00000157793 132 ntBASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Gm22428-201ENSMUST00000158554 132 ntBASIC5.82□□□□□ -1.48
Trim8Q99PJ2 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Gm17198-201ENSMUST00000171792 1154 ntBASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Mir6921-201ENSMUST00000183719 80 ntBASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Mir6989-201ENSMUST00000184812 65 ntBASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Gm29475-201ENSMUST00000190767 312 ntBASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Gm33178-201ENSMUST00000212090 257 ntBASIC5.82□□□□□ -1.48
Trim8Q99PJ2 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim8Q99PJ2 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim8Q99PJ2 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim8Q99PJ2 AC154552.5-201ENSMUST00000222352 207 ntBASIC5.82□□□□□ -1.48
Trim8Q99PJ2 AC158521.1-202ENSMUST00000224352 645 ntBASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trim8Q99PJ2 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Gm24144-201ENSMUST00000082632 111 ntBASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Gm24200-201ENSMUST00000082955 157 ntBASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trim8Q99PJ2 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim8Q99PJ2 AC124446.1-201ENSMUST00000221027 2644 ntBASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.82□□□□□ -1.48
Trim8Q99PJ2 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim8Q99PJ2 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Trim8Q99PJ2 Gm38277-201ENSMUST00000195172 1367 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 AC124426.1-203ENSMUST00000221814 1362 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim8Q99PJ2 AC134860.3-201ENSMUST00000223564 1300 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Gm37393-201ENSMUST00000195118 3870 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Gm26377-201ENSMUST00000102184 108 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Gm25346-201ENSMUST00000104509 128 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Gm2986-201ENSMUST00000121603 382 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Sms-ps-201ENSMUST00000121773 1101 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Mup-ps4-201ENSMUST00000151005 539 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Snora47-201ENSMUST00000157483 138 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Gm17511-201ENSMUST00000172206 342 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Gm20530-201ENSMUST00000174261 254 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Gm28883-201ENSMUST00000189256 369 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Gm6074-201ENSMUST00000193340 451 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Mir142-201ENSMUST00000198092 64 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Gm42976-201ENSMUST00000200313 222 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Gm31520-201ENSMUST00000203048 733 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Gm6064-201ENSMUST00000203999 454 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Gm44940-201ENSMUST00000206225 1247 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Gm44857-201ENSMUST00000208331 196 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Gm44909-201ENSMUST00000208756 165 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Gm45628-201ENSMUST00000210849 274 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim8Q99PJ2 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 AC153357.1-201ENSMUST00000219190 482 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 CT033778.1-201ENSMUST00000224767 767 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 AV026068-237ENSMUST00000226075 572 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 CT010453.2-201ENSMUST00000227005 483 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 AC137902.1-201ENSMUST00000228184 102 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 AC139197.1-201ENSMUST00000228332 813 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 AC114916.1-201ENSMUST00000228465 494 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Trim8Q99PJ2 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Trim8Q99PJ2 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms