Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm18416-201ENSMUST00000175635 1003 ntBASIC5.94□□□□□ -1.46
Pcdha9Q91Y11 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC5.94□□□□□ -1.46
Pcdha9Q91Y11 Gm27148-201ENSMUST00000185086 160 ntBASIC5.94□□□□□ -1.46
Pcdha9Q91Y11 Gm8498-201ENSMUST00000188227 974 ntBASIC5.94□□□□□ -1.46
Pcdha9Q91Y11 Gm8419-201ENSMUST00000189886 412 ntBASIC5.94□□□□□ -1.46
Pcdha9Q91Y11 Gm38166-201ENSMUST00000191660 471 ntBASIC5.94□□□□□ -1.46
Pcdha9Q91Y11 Gm18553-201ENSMUST00000194152 634 ntBASIC5.94□□□□□ -1.46
Pcdha9Q91Y11 Gm34149-201ENSMUST00000203547 304 ntBASIC5.94□□□□□ -1.46
Pcdha9Q91Y11 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdha9Q91Y11 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.94□□□□□ -1.46
Pcdha9Q91Y11 Gm4032-201ENSMUST00000210886 487 ntBASIC5.94□□□□□ -1.46
Pcdha9Q91Y11 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdha9Q91Y11 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.94□□□□□ -1.46
Pcdha9Q91Y11 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC5.94□□□□□ -1.46
Pcdha9Q91Y11 AC122301.1-201ENSMUST00000219625 507 ntBASIC5.94□□□□□ -1.46
Pcdha9Q91Y11 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC5.94□□□□□ -1.46
Pcdha9Q91Y11 AC173345.3-201ENSMUST00000221245 1093 ntBASIC5.94□□□□□ -1.46
Pcdha9Q91Y11 CT033778.1-201ENSMUST00000224767 767 ntBASIC5.94□□□□□ -1.46
Pcdha9Q91Y11 n-R5s204-201ENSMUST00000082972 119 ntBASIC5.94□□□□□ -1.46
Pcdha9Q91Y11 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdha9Q91Y11 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Pcdha9Q91Y11 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdha9Q91Y11 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Pcdha9Q91Y11 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdha9Q91Y11 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdha9Q91Y11 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdha9Q91Y11 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.94□□□□□ -1.46
Pcdha9Q91Y11 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm5381-201ENSMUST00000117975 1250 ntBASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm12677-201ENSMUST00000118668 426 ntBASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm11447-201ENSMUST00000118983 858 ntBASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm11746-201ENSMUST00000119843 821 ntBASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm14989-201ENSMUST00000120497 207 ntBASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm11389-201ENSMUST00000121407 430 ntBASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm23539-201ENSMUST00000157537 224 ntBASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm22518-201ENSMUST00000158267 68 ntBASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Scarna10-201ENSMUST00000158992 325 ntBASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Mir6921-201ENSMUST00000183719 80 ntBASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm9541-201ENSMUST00000188409 502 ntBASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm37543-201ENSMUST00000192443 1031 ntBASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm36939-201ENSMUST00000194889 439 ntBASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm44300-201ENSMUST00000196792 121 ntBASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm42857-201ENSMUST00000200823 339 ntBASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm18855-201ENSMUST00000206689 570 ntBASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm18877-201ENSMUST00000207706 539 ntBASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm44623-201ENSMUST00000207934 434 ntBASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm18892-201ENSMUST00000217628 881 ntBASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 AC192616.1-201ENSMUST00000221922 132 ntBASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.93□□□□□ -1.46
Pcdha9Q91Y11 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 123.8 ms