Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm10087-201ENSMUST00000167650 330 ntBASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Mir7211-201ENSMUST00000184071 63 ntBASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Gm29376-201ENSMUST00000189357 835 ntBASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Gm42619-201ENSMUST00000197564 1136 ntBASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Gm44214-201ENSMUST00000204153 606 ntBASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 AC105407.3-201ENSMUST00000224161 648 ntBASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Gm23511-201ENSMUST00000083084 164 ntBASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 n-R5s27-201ENSMUST00000093699 119 ntBASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Gm14806-201ENSMUST00000116606 2110 ntBASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Gm38259-201ENSMUST00000194602 3534 ntBASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Gm37393-201ENSMUST00000195118 3870 ntBASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Gm15185-201ENSMUST00000117397 746 ntBASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Gm12849-201ENSMUST00000120013 739 ntBASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Gm13259-201ENSMUST00000120792 456 ntBASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Gm11278-201ENSMUST00000121002 997 ntBASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Gm13077-201ENSMUST00000121941 484 ntBASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Gm24383-201ENSMUST00000122691 333 ntBASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Gm9428-201ENSMUST00000127214 769 ntBASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Gm25489-201ENSMUST00000158727 141 ntBASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Mir3095-201ENSMUST00000175552 87 ntBASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Gm27781-201ENSMUST00000185185 92 ntBASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Gm36998-201ENSMUST00000193205 704 ntBASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Gm42522-201ENSMUST00000196071 255 ntBASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Gm42753-201ENSMUST00000196718 1268 ntBASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 n-TStga1-201ENSMUST00000199903 109 ntBASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Gm43922-201ENSMUST00000205071 328 ntBASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Glud-ps-201ENSMUST00000206310 657 ntBASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Gm18599-201ENSMUST00000206729 1125 ntBASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Gm18541-201ENSMUST00000215935 538 ntBASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 AC102291.1-201ENSMUST00000227164 529 ntBASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc40Q8BI79 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Gm37569-201ENSMUST00000192111 1722 ntBASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Gm2033-201ENSMUST00000210753 2287 ntBASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ccdc40Q8BI79 Gm12401-201ENSMUST00000118435 228 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms