Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm12267-201ENSMUST00000121609 761 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Gm15885-201ENSMUST00000122114 388 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Gm11575-201ENSMUST00000122243 228 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Gm24840-201ENSMUST00000122603 147 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Gm4832-201ENSMUST00000182679 399 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Gm18802-201ENSMUST00000186270 888 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Gm42776-201ENSMUST00000198031 406 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Gm43136-201ENSMUST00000200403 636 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Gm35648-201ENSMUST00000202304 475 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Gm45034-201ENSMUST00000206831 482 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Gm45777-201ENSMUST00000213009 301 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Gm19174-201ENSMUST00000216944 956 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 AC153932.1-201ENSMUST00000218558 787 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 AC134860.4-201ENSMUST00000223592 978 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 AC167977.2-201ENSMUST00000225676 682 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Mir133b-201ENSMUST00000083546 119 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Gm37092-201ENSMUST00000193381 1518 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gm25414-201ENSMUST00000101814 107 ntBASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gm25422-201ENSMUST00000104219 129 ntBASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gm13451-201ENSMUST00000117649 592 ntBASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gm16007-201ENSMUST00000117837 286 ntBASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gm13579-201ENSMUST00000118519 517 ntBASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gm2003-201ENSMUST00000118537 636 ntBASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gm15141-201ENSMUST00000121860 729 ntBASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gm1989-201ENSMUST00000126244 636 ntBASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gm22596-201ENSMUST00000157601 316 ntBASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gm26172-201ENSMUST00000158421 134 ntBASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gm23631-201ENSMUST00000175291 123 ntBASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gm27855-201ENSMUST00000184122 128 ntBASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gm2325-201ENSMUST00000186637 581 ntBASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gm6137-201ENSMUST00000187552 578 ntBASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gm43078-201ENSMUST00000197222 168 ntBASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gm20940-201ENSMUST00000197308 360 ntBASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gm38670-201ENSMUST00000199248 77 ntBASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gm44234-201ENSMUST00000204246 900 ntBASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gm18877-201ENSMUST00000207706 539 ntBASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gm18598-201ENSMUST00000207724 597 ntBASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 CU024910.1-201ENSMUST00000214310 418 ntBASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 AC132384.8-201ENSMUST00000218152 1204 ntBASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 AC154583.1-201ENSMUST00000224788 655 ntBASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 AC131068.1-201ENSMUST00000226891 482 ntBASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ubfd1Q78JW9 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms