Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col8a1Q00780 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm16436-201ENSMUST00000121510 1607 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col8a1Q00780 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col8a1Q00780 CT009480.2-201ENSMUST00000225152 3369 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 AC135119.1-204ENSMUST00000228036 2663 ntBASIC5.41□□□□□ -1.54
Col8a1Q00780 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col8a1Q00780 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm19074-201ENSMUST00000218915 1429 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col8a1Q00780 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col8a1Q00780 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col8a1Q00780 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Col8a1Q00780 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Col8a1Q00780 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col8a1Q00780 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC5.4□□□□□ -1.54
Col8a1Q00780 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col8a1Q00780 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col8a1Q00780 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col8a1Q00780 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC5.4□□□□□ -1.54
Col8a1Q00780 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Col8a1Q00780 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col8a1Q00780 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm37216-201ENSMUST00000193817 3478 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col8a1Q00780 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col8a1Q00780 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Col8a1Q00780 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm13803-201ENSMUST00000117547 489 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm5381-201ENSMUST00000117975 1250 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm11833-201ENSMUST00000118393 853 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm14158-201ENSMUST00000118409 308 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm14293-201ENSMUST00000118528 577 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm3943-201ENSMUST00000118606 718 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm15801-201ENSMUST00000120920 522 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm14796-201ENSMUST00000121216 959 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm15237-201ENSMUST00000122104 469 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm11254-201ENSMUST00000122368 653 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm24385-201ENSMUST00000122694 350 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm25979-201ENSMUST00000157177 138 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm22820-201ENSMUST00000157205 329 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm24216-201ENSMUST00000158259 117 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm25487-201ENSMUST00000158725 125 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm8783-201ENSMUST00000159764 522 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm6808-201ENSMUST00000162341 807 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm6245-201ENSMUST00000164699 768 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm8358-201ENSMUST00000167222 555 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Col8a1Q00780 Mir1264-201ENSMUST00000175381 86 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col8a1Q00780 Mir3473e-201ENSMUST00000183932 110 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm29197-201ENSMUST00000185922 702 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm8861-201ENSMUST00000196346 832 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm9480-201ENSMUST00000198038 616 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm5288-201ENSMUST00000198323 1119 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Mir6994-201ENSMUST00000198985 73 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC5.4□□□□□ -1.54
Col8a1Q00780 AC135353.1-201ENSMUST00000215330 630 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC5.4□□□□□ -1.54
Col8a1Q00780 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm7984-201ENSMUST00000060640 538 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Col8a1Q00780 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm5582-201ENSMUST00000075251 522 ntBASIC5.4□□□□□ -1.54
Col8a1Q00780 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col8a1Q00780 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC5.4□□□□□ -1.54
Col8a1Q00780 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Col8a1Q00780 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC5.4□□□□□ -1.55
Col8a1Q00780 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC5.4□□□□□ -1.55
Col8a1Q00780 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
Col8a1Q00780 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Col8a1Q00780 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Col8a1Q00780 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC5.4□□□□□ -1.55
Col8a1Q00780 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Col8a1Q00780 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC5.4□□□□□ -1.55
Col8a1Q00780 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Col8a1Q00780 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC5.4□□□□□ -1.55
Col8a1Q00780 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC5.4□□□□□ -1.55
Col8a1Q00780 Gm38322-201ENSMUST00000194074 2300 ntBASIC5.4□□□□□ -1.55
Col8a1Q00780 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Col8a1Q00780 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
Col8a1Q00780 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Col8a1Q00780 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
Col8a1Q00780 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Col8a1Q00780 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col8a1Q00780 Gm42534-201ENSMUST00000196063 1754 ntBASIC5.39□□□□□ -1.55
Col8a1Q00780 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Col8a1Q00780 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 99 ms