Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Pla2r1-201ENSMUST00000112525 7112 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PrkdcP97313 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PrkdcP97313 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PrkdcP97313 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.87
PrkdcP97313 Gm8051-201ENSMUST00000120464 466 ntBASIC3.4□□□□□ -1.87
PrkdcP97313 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PrkdcP97313 Gm23554-201ENSMUST00000157818 110 ntBASIC3.4□□□□□ -1.87
PrkdcP97313 Gm4734-201ENSMUST00000200117 777 ntBASIC3.4□□□□□ -1.87
PrkdcP97313 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC3.4□□□□□ -1.87
PrkdcP97313 CT030242.3-201ENSMUST00000221231 581 ntBASIC3.4□□□□□ -1.87
PrkdcP97313 AL589742.1-201ENSMUST00000226034 349 ntBASIC3.4□□□□□ -1.87
PrkdcP97313 CT009600.2-201ENSMUST00000226638 481 ntBASIC3.4□□□□□ -1.87
PrkdcP97313 Gm6104-201ENSMUST00000078030 603 ntBASIC3.4□□□□□ -1.87
PrkdcP97313 Gm22456-201ENSMUST00000082578 125 ntBASIC3.4□□□□□ -1.87
PrkdcP97313 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
PrkdcP97313 Gm7529-201ENSMUST00000213753 1897 ntBASIC3.4□□□□□ -1.87
PrkdcP97313 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
PrkdcP97313 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC3.4□□□□□ -1.87
PrkdcP97313 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PrkdcP97313 Zfp709-203ENSMUST00000188685 7186 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PrkdcP97313 Gm37509-201ENSMUST00000194867 3169 ntBASIC3.4□□□□□ -1.87
PrkdcP97313 Rgs8-202ENSMUST00000111810 5614 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PrkdcP97313 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC3.4□□□□□ -1.87
PrkdcP97313 AC142245.1-201ENSMUST00000226611 1505 ntBASIC3.4□□□□□ -1.87
PrkdcP97313 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PrkdcP97313 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
PrkdcP97313 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PrkdcP97313 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PrkdcP97313 Gm44901-201ENSMUST00000208157 3977 ntBASIC3.39□□□□□ -1.87
PrkdcP97313 Gm43363-201ENSMUST00000201590 2647 ntBASIC3.39□□□□□ -1.87
PrkdcP97313 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PrkdcP97313 Gm26140-201ENSMUST00000103807 110 ntBASIC3.39□□□□□ -1.87
PrkdcP97313 Gm13484-201ENSMUST00000120738 412 ntBASIC3.39□□□□□ -1.87
PrkdcP97313 Gm37857-201ENSMUST00000191784 1199 ntBASIC3.39□□□□□ -1.87
PrkdcP97313 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC3.39□□□□□ -1.87
PrkdcP97313 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC3.39□□□□□ -1.87
PrkdcP97313 Gm44294-201ENSMUST00000205090 728 ntBASIC3.39□□□□□ -1.87
PrkdcP97313 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC3.39□□□□□ -1.87
PrkdcP97313 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC3.39□□□□□ -1.87
PrkdcP97313 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PrkdcP97313 Gm4036-201ENSMUST00000220842 626 ntBASIC3.39□□□□□ -1.87
PrkdcP97313 Gm3086-202ENSMUST00000221248 310 ntBASIC3.39□□□□□ -1.87
PrkdcP97313 Snora30-201ENSMUST00000083325 130 ntBASIC3.39□□□□□ -1.87
PrkdcP97313 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
PrkdcP97313 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
PrkdcP97313 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC3.39□□□□□ -1.87
PrkdcP97313 Gm36981-201ENSMUST00000192340 4485 ntBASIC3.39□□□□□ -1.87
PrkdcP97313 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PrkdcP97313 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PrkdcP97313 Gm37478-201ENSMUST00000193624 3495 ntBASIC3.39□□□□□ -1.87
PrkdcP97313 Gm8215-201ENSMUST00000120627 990 ntBASIC3.39□□□□□ -1.87
PrkdcP97313 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
PrkdcP97313 Gm6632-201ENSMUST00000168425 954 ntBASIC3.39□□□□□ -1.87
PrkdcP97313 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PrkdcP97313 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC3.39□□□□□ -1.87
PrkdcP97313 Gm46998-201ENSMUST00000221444 330 ntBASIC3.39□□□□□ -1.87
PrkdcP97313 Pdgfra-201ENSMUST00000000476 6549 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PrkdcP97313 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PrkdcP97313 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
PrkdcP97313 Gm19084-201ENSMUST00000222939 1762 ntBASIC3.39□□□□□ -1.87
PrkdcP97313 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
PrkdcP97313 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
PrkdcP97313 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
PrkdcP97313 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
PrkdcP97313 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PrkdcP97313 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PrkdcP97313 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC3.39□□□□□ -1.87
PrkdcP97313 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PrkdcP97313 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PrkdcP97313 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PrkdcP97313 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PrkdcP97313 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
PrkdcP97313 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
PrkdcP97313 Gm13867-201ENSMUST00000120844 395 ntBASIC3.39□□□□□ -1.87
PrkdcP97313 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC3.39□□□□□ -1.87
PrkdcP97313 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC3.39□□□□□ -1.87
PrkdcP97313 Gm18183-201ENSMUST00000191024 615 ntBASIC3.39□□□□□ -1.87
PrkdcP97313 AC125539.1-202ENSMUST00000226449 670 ntBASIC3.39□□□□□ -1.87
PrkdcP97313 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
PrkdcP97313 Gm5084-202ENSMUST00000224064 3609 ntBASIC3.39□□□□□ -1.87
PrkdcP97313 Gm45129-201ENSMUST00000208444 2224 ntBASIC3.39□□□□□ -1.87
PrkdcP97313 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
PrkdcP97313 Gm38043-201ENSMUST00000195501 5141 ntBASIC3.39□□□□□ -1.87
PrkdcP97313 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PrkdcP97313 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PrkdcP97313 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PrkdcP97313 Gm11369-201ENSMUST00000120812 318 ntBASIC3.38□□□□□ -1.87
PrkdcP97313 Gm5383-201ENSMUST00000121177 617 ntBASIC3.38□□□□□ -1.87
PrkdcP97313 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PrkdcP97313 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC3.38□□□□□ -1.87
PrkdcP97313 Gm43144-201ENSMUST00000198256 485 ntBASIC3.38□□□□□ -1.87
PrkdcP97313 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC3.38□□□□□ -1.87
PrkdcP97313 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC3.38□□□□□ -1.87
PrkdcP97313 Gm24166-201ENSMUST00000082724 135 ntBASIC3.38□□□□□ -1.87
PrkdcP97313 Mir26a-2-201ENSMUST00000083496 84 ntBASIC3.38□□□□□ -1.87
PrkdcP97313 Gm37233-201ENSMUST00000192173 6263 ntBASIC3.38□□□□□ -1.87
PrkdcP97313 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PrkdcP97313 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC3.38□□□□□ -1.87
PrkdcP97313 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PrkdcP97313 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms