Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC7.79□□□□□ -1.16
Cux1P53564 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Cux1P53564 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Cux1P53564 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC7.79□□□□□ -1.16
Cux1P53564 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC7.79□□□□□ -1.16
Cux1P53564 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
Cux1P53564 Rab26os-201ENSMUST00000176215 477 ntBASIC7.79□□□□□ -1.16
Cux1P53564 Gm27568-201ENSMUST00000184220 99 ntBASIC7.79□□□□□ -1.16
Cux1P53564 Gm37836-201ENSMUST00000195875 175 ntBASIC7.79□□□□□ -1.16
Cux1P53564 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC7.79□□□□□ -1.16
Cux1P53564 AC158803.3-201ENSMUST00000220024 211 ntBASIC7.79□□□□□ -1.16
Cux1P53564 AC157515.1-201ENSMUST00000220953 450 ntBASIC7.79□□□□□ -1.16
Cux1P53564 AC154627.3-201ENSMUST00000228441 334 ntBASIC7.79□□□□□ -1.16
Cux1P53564 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC7.79□□□□□ -1.16
Cux1P53564 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Cux1P53564 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Cux1P53564 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Cux1P53564 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
Cux1P53564 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Cux1P53564 CT025710.1-201ENSMUST00000222949 2533 ntBASIC7.79□□□□□ -1.16
Cux1P53564 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Cux1P53564 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Cux1P53564 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC7.79□□□□□ -1.16
Cux1P53564 Gm42510-201ENSMUST00000196470 2258 ntBASIC7.79□□□□□ -1.16
Cux1P53564 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Cux1P53564 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
Cux1P53564 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Cux1P53564 Gm14831-201ENSMUST00000120253 409 ntBASIC7.78□□□□□ -1.16
Cux1P53564 n-R5s21-201ENSMUST00000122692 117 ntBASIC7.78□□□□□ -1.16
Cux1P53564 Gm26085-201ENSMUST00000157900 116 ntBASIC7.78□□□□□ -1.16
Cux1P53564 Gm5558-201ENSMUST00000178933 495 ntBASIC7.78□□□□□ -1.16
Cux1P53564 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Cux1P53564 Gm28957-201ENSMUST00000190174 373 ntBASIC7.78□□□□□ -1.16
Cux1P53564 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC7.78□□□□□ -1.16
Cux1P53564 Gm45209-201ENSMUST00000207122 353 ntBASIC7.78□□□□□ -1.16
Cux1P53564 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC7.78□□□□□ -1.16
Cux1P53564 AC154283.1-201ENSMUST00000228417 389 ntBASIC7.78□□□□□ -1.16
Cux1P53564 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cux1P53564 Gm43386-201ENSMUST00000199654 4001 ntBASIC7.78□□□□□ -1.16
Cux1P53564 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cux1P53564 Gm43843-201ENSMUST00000202396 1587 ntBASIC7.78□□□□□ -1.16
Cux1P53564 Gm43528-201ENSMUST00000199492 1674 ntBASIC7.78□□□□□ -1.16
Cux1P53564 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cux1P53564 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cux1P53564 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Cux1P53564 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cux1P53564 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cux1P53564 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Cux1P53564 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Cux1P53564 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cux1P53564 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cux1P53564 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cux1P53564 AC139754.2-201ENSMUST00000218037 1455 ntBASIC7.78□□□□□ -1.16
Cux1P53564 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC7.78□□□□□ -1.16
Cux1P53564 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Cux1P53564 Igkv11-106-201ENSMUST00000103331 346 ntBASIC7.78□□□□□ -1.16
Cux1P53564 Gm14909-201ENSMUST00000117853 351 ntBASIC7.78□□□□□ -1.16
Cux1P53564 Gm12231-201ENSMUST00000119447 695 ntBASIC7.78□□□□□ -1.16
Cux1P53564 Gm27611-201ENSMUST00000184690 108 ntBASIC7.78□□□□□ -1.16
Cux1P53564 Mir6899-201ENSMUST00000184798 64 ntBASIC7.78□□□□□ -1.16
Cux1P53564 AC154354.1-201ENSMUST00000224585 2109 ntBASIC7.78□□□□□ -1.16
Cux1P53564 Gm26330-201ENSMUST00000082817 104 ntBASIC7.78□□□□□ -1.16
Cux1P53564 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
Cux1P53564 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC7.77□□□□□ -1.16
Cux1P53564 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Cux1P53564 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cux1P53564 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cux1P53564 Gm43210-201ENSMUST00000196743 6152 ntBASIC7.77□□□□□ -1.17
Cux1P53564 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cux1P53564 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Cux1P53564 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Cux1P53564 AC131329.1-201ENSMUST00000221204 3487 ntBASIC7.77□□□□□ -1.17
Cux1P53564 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC7.77□□□□□ -1.17
Cux1P53564 Gm13932-201ENSMUST00000120873 610 ntBASIC7.77□□□□□ -1.17
Cux1P53564 Gm23069-201ENSMUST00000158240 311 ntBASIC7.77□□□□□ -1.17
Cux1P53564 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cux1P53564 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Cux1P53564 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Cux1P53564 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Cux1P53564 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Cux1P53564 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Cux1P53564 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Cux1P53564 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Cux1P53564 Gm9655-201ENSMUST00000211321 1284 ntBASIC7.77□□□□□ -1.17
Cux1P53564 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Cux1P53564 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cux1P53564 AC124414.1-201ENSMUST00000218033 2946 ntBASIC7.77□□□□□ -1.17
Cux1P53564 AC126439.1-201ENSMUST00000226772 2104 ntBASIC7.77□□□□□ -1.17
Cux1P53564 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Cux1P53564 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Cux1P53564 Gm37890-201ENSMUST00000195610 3992 ntBASIC7.76□□□□□ -1.17
Cux1P53564 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
Cux1P53564 Gm10727-201ENSMUST00000197107 1602 ntBASIC7.76□□□□□ -1.17
Cux1P53564 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
Cux1P53564 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Cux1P53564 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Cux1P53564 Gm27818-201ENSMUST00000184536 159 ntBASIC7.76□□□□□ -1.17
Cux1P53564 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Cux1P53564 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Cux1P53564 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms