Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm11227-201ENSMUST00000119774 471 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm6175-201ENSMUST00000121351 400 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC6.03□□□□□ -1.44
Shmt1P50431 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC6.03□□□□□ -1.44
Shmt1P50431 Gm22895-201ENSMUST00000157508 308 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm24190-201ENSMUST00000157976 216 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm15740-201ENSMUST00000159703 1292 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm28637-201ENSMUST00000179424 345 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm21045-201ENSMUST00000183058 1020 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm27887-201ENSMUST00000184367 102 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm28943-201ENSMUST00000186187 615 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm28736-201ENSMUST00000186257 615 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm29401-201ENSMUST00000186690 615 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm29178-204ENSMUST00000186784 615 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm28589-201ENSMUST00000186991 615 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm28936-201ENSMUST00000187153 615 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm29121-201ENSMUST00000187611 615 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm28243-201ENSMUST00000187801 615 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm28844-202ENSMUST00000187977 615 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm29058-201ENSMUST00000189510 615 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm6445-201ENSMUST00000189515 1112 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm21489-201ENSMUST00000189668 818 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Shmt1P50431 Gm28507-201ENSMUST00000189737 703 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm29624-201ENSMUST00000190018 615 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Shmt1P50431 Gm28780-201ENSMUST00000190223 615 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm28969-211ENSMUST00000190992 615 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm28990-207ENSMUST00000191219 615 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm36468-201ENSMUST00000192119 615 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm31572-201ENSMUST00000193341 615 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm30175-201ENSMUST00000194173 615 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm30858-201ENSMUST00000195516 615 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm42522-201ENSMUST00000196071 255 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm43743-202ENSMUST00000198353 491 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm7733-201ENSMUST00000199038 919 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC6.03□□□□□ -1.44
Shmt1P50431 Gm45185-201ENSMUST00000207556 404 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm45912-201ENSMUST00000210646 543 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm45249-201ENSMUST00000211021 348 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm9685-201ENSMUST00000211275 538 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm9655-201ENSMUST00000211321 1284 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm45874-201ENSMUST00000212423 346 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 AC115047.1-201ENSMUST00000213795 322 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 AC122332.1-201ENSMUST00000214384 285 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 AC069561.2-201ENSMUST00000217596 420 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 AC110381.1-201ENSMUST00000218987 586 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm19134-201ENSMUST00000221203 487 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 AC166358.3-201ENSMUST00000221456 181 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm9202-201ENSMUST00000223036 437 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 AC125543.4-201ENSMUST00000223385 117 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Shmt1P50431 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Shmt1P50431 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Shmt1P50431 Gm6863-201ENSMUST00000052882 636 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Shmt1P50431 Gm22043-201ENSMUST00000082993 158 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Shmt1P50431 Mir463-201ENSMUST00000093570 75 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Shmt1P50431 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Shmt1P50431 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
Shmt1P50431 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Shmt1P50431 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
Shmt1P50431 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Shmt1P50431 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Shmt1P50431 Gm37911-201ENSMUST00000193099 1545 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Shmt1P50431 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Shmt1P50431 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Shmt1P50431 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC6.03□□□□□ -1.44
Shmt1P50431 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Shmt1P50431 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Shmt1P50431 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Shmt1P50431 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Shmt1P50431 Gm42727-201ENSMUST00000202446 2823 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.02□□□□□ -1.44
Shmt1P50431 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.02□□□□□ -1.45
Shmt1P50431 Gm6982-201ENSMUST00000118752 1560 ntBASIC6.02□□□□□ -1.45
Shmt1P50431 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Shmt1P50431 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Shmt1P50431 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Shmt1P50431 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
Shmt1P50431 CT025686.2-201ENSMUST00000227898 3315 ntBASIC6.02□□□□□ -1.45
Shmt1P50431 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Shmt1P50431 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Shmt1P50431 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Shmt1P50431 Gm13890-201ENSMUST00000117578 390 ntBASIC6.02□□□□□ -1.45
Shmt1P50431 Gm11908-201ENSMUST00000117755 347 ntBASIC6.02□□□□□ -1.45
Shmt1P50431 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.02□□□□□ -1.45
Shmt1P50431 Gm23111-201ENSMUST00000122652 105 ntBASIC6.02□□□□□ -1.45
Shmt1P50431 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Shmt1P50431 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC6.02□□□□□ -1.45
Shmt1P50431 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC6.02□□□□□ -1.45
Shmt1P50431 Gm19200-201ENSMUST00000182579 1001 ntBASIC6.02□□□□□ -1.45
Shmt1P50431 Gm27762-201ENSMUST00000183417 109 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms