Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm6808-201ENSMUST00000162341 807 ntBASIC7.34□□□□□ -1.23
Rfx1P48377 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC7.34□□□□□ -1.23
Rfx1P48377 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Rfx1P48377 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC7.34□□□□□ -1.23
Rfx1P48377 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC7.34□□□□□ -1.23
Rfx1P48377 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC7.34□□□□□ -1.23
Rfx1P48377 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC7.34□□□□□ -1.23
Rfx1P48377 Gm44404-201ENSMUST00000203979 636 ntBASIC7.34□□□□□ -1.23
Rfx1P48377 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC7.34□□□□□ -1.23
Rfx1P48377 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC7.34□□□□□ -1.23
Rfx1P48377 Gm45405-201ENSMUST00000211544 609 ntBASIC7.34□□□□□ -1.23
Rfx1P48377 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Rfx1P48377 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC7.34□□□□□ -1.23
Rfx1P48377 AC164550.1-201ENSMUST00000217821 1066 ntBASIC7.34□□□□□ -1.23
Rfx1P48377 AC079644.1-201ENSMUST00000220586 405 ntBASIC7.34□□□□□ -1.23
Rfx1P48377 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC7.34□□□□□ -1.23
Rfx1P48377 AC154431.2-201ENSMUST00000225215 1055 ntBASIC7.34□□□□□ -1.23
Rfx1P48377 AC158750.1-201ENSMUST00000226163 634 ntBASIC7.34□□□□□ -1.23
Rfx1P48377 AC141884.1-201ENSMUST00000226327 636 ntBASIC7.34□□□□□ -1.23
Rfx1P48377 AC123665.3-201ENSMUST00000228735 1216 ntBASIC7.34□□□□□ -1.23
Rfx1P48377 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Rfx1P48377 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Rfx1P48377 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC7.34□□□□□ -1.23
Rfx1P48377 Mir3068-201ENSMUST00000083004 136 ntBASIC7.34□□□□□ -1.23
Rfx1P48377 Mir421-201ENSMUST00000083575 76 ntBASIC7.34□□□□□ -1.23
Rfx1P48377 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC7.34□□□□□ -1.23
Rfx1P48377 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC7.34□□□□□ -1.23
Rfx1P48377 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Rfx1P48377 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rfx1P48377 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Rfx1P48377 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC7.34□□□□□ -1.23
Rfx1P48377 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rfx1P48377 Gm38322-201ENSMUST00000194074 2300 ntBASIC7.34□□□□□ -1.23
Rfx1P48377 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Rfx1P48377 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rfx1P48377 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.24
Rfx1P48377 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Rfx1P48377 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC7.33□□□□□ -1.24
Rfx1P48377 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Rfx1P48377 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Rfx1P48377 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Rfx1P48377 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Rfx1P48377 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Rfx1P48377 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Rfx1P48377 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Rfx1P48377 Gm44676-201ENSMUST00000208520 3055 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Rfx1P48377 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Rfx1P48377 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Rfx1P48377 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Rfx1P48377 Gm9144-201ENSMUST00000101625 1008 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Rfx1P48377 Gm22103-201ENSMUST00000116733 121 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Gm26475-201ENSMUST00000116769 121 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Gm23620-201ENSMUST00000116812 121 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Gm25042-201ENSMUST00000116856 121 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Gm25540-201ENSMUST00000116880 121 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Gm8202-201ENSMUST00000117682 310 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Gm11943-201ENSMUST00000119473 327 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC7.33□□□□□ -1.24
Rfx1P48377 Gm23032-201ENSMUST00000157995 107 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Gm26352-201ENSMUST00000158223 125 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Gm25487-201ENSMUST00000158725 125 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Gm5929-201ENSMUST00000166883 487 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Gm17121-201ENSMUST00000170414 847 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Rfx1P48377 Gm23550-201ENSMUST00000179003 121 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Gm25123-201ENSMUST00000179154 121 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Gm25353-201ENSMUST00000179366 121 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Gm22992-201ENSMUST00000179496 121 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Gm25892-201ENSMUST00000179867 121 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Gm17222-201ENSMUST00000180135 847 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Gm24092-201ENSMUST00000180257 121 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC7.33□□□□□ -1.24
Rfx1P48377 Gm19480-201ENSMUST00000185547 667 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Rfx1P48377 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Rfx1P48377 Gm37719-201ENSMUST00000194615 292 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Ighv1-21-201ENSMUST00000194856 351 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Gm31230-201ENSMUST00000199725 785 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Gm43561-201ENSMUST00000199866 448 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Gm32158-201ENSMUST00000200135 404 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 AC120011.1-201ENSMUST00000202147 744 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Gm7832-201ENSMUST00000202613 880 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Gm3549-201ENSMUST00000203873 794 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 AC124420.1-201ENSMUST00000219779 791 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 AC158981.3-202ENSMUST00000228906 523 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC7.33□□□□□ -1.24
Rfx1P48377 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Rfx1P48377 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Rfx1P48377 Gm9496-201ENSMUST00000191295 1601 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
Rfx1P48377 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
Rfx1P48377 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Rfx1P48377 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Rfx1P48377 Gm14976-201ENSMUST00000117055 1394 ntBASIC7.33□□□□□ -1.24
Rfx1P48377 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms