Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm2914-201ENSMUST00000186120 328 ntBASIC4.86□□□□□ -1.63
Sox6P40645 Gm29284-201ENSMUST00000188363 255 ntBASIC4.86□□□□□ -1.63
Sox6P40645 Gm37681-201ENSMUST00000193880 727 ntBASIC4.86□□□□□ -1.63
Sox6P40645 Gm37517-201ENSMUST00000194004 1289 ntBASIC4.86□□□□□ -1.63
Sox6P40645 Gm38384-201ENSMUST00000195413 1122 ntBASIC4.86□□□□□ -1.63
Sox6P40645 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC4.86□□□□□ -1.63
Sox6P40645 Gm6543-201ENSMUST00000197353 808 ntBASIC4.86□□□□□ -1.63
Sox6P40645 Gm43444-201ENSMUST00000198123 291 ntBASIC4.86□□□□□ -1.63
Sox6P40645 Gm38670-201ENSMUST00000199248 77 ntBASIC4.86□□□□□ -1.63
Sox6P40645 Gm18011-201ENSMUST00000203717 565 ntBASIC4.86□□□□□ -1.63
Sox6P40645 Gm6261-201ENSMUST00000204707 760 ntBASIC4.86□□□□□ -1.63
Sox6P40645 Glud-ps-201ENSMUST00000206310 657 ntBASIC4.86□□□□□ -1.63
Sox6P40645 Gm3257-201ENSMUST00000207217 675 ntBASIC4.86□□□□□ -1.63
Sox6P40645 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Sox6P40645 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC4.86□□□□□ -1.63
Sox6P40645 Gm17999-201ENSMUST00000211568 542 ntBASIC4.86□□□□□ -1.63
Sox6P40645 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC4.86□□□□□ -1.63
Sox6P40645 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Sox6P40645 AC123064.2-201ENSMUST00000217758 193 ntBASIC4.86□□□□□ -1.63
Sox6P40645 Gm5176-201ENSMUST00000218244 1227 ntBASIC4.86□□□□□ -1.63
Sox6P40645 AC156798.1-201ENSMUST00000220508 224 ntBASIC4.86□□□□□ -1.63
Sox6P40645 AC131100.2-201ENSMUST00000227701 998 ntBASIC4.86□□□□□ -1.63
Sox6P40645 AC157572.4-201ENSMUST00000228203 549 ntBASIC4.86□□□□□ -1.63
Sox6P40645 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Sox6P40645 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Sox6P40645 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Sox6P40645 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Sox6P40645 Gm23511-201ENSMUST00000083084 164 ntBASIC4.86□□□□□ -1.63
Sox6P40645 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Sox6P40645 Gm45149-201ENSMUST00000206459 2172 ntBASIC4.86□□□□□ -1.63
Sox6P40645 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.86□□□□□ -1.63
Sox6P40645 Gm43319-201ENSMUST00000198036 2270 ntBASIC4.86□□□□□ -1.63
Sox6P40645 AC136019.1-201ENSMUST00000226503 1412 ntBASIC4.86□□□□□ -1.63
Sox6P40645 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.86□□□□□ -1.63
Sox6P40645 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Sox6P40645 Gm43027-201ENSMUST00000202906 3691 ntBASIC4.86□□□□□ -1.63
Sox6P40645 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Sox6P40645 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Sox6P40645 Gm38029-201ENSMUST00000192669 2090 ntBASIC4.85□□□□□ -1.63
Sox6P40645 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Sox6P40645 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Sox6P40645 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Sox6P40645 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Sox6P40645 Gm37762-201ENSMUST00000194515 3561 ntBASIC4.85□□□□□ -1.63
Sox6P40645 Gm3943-201ENSMUST00000118606 718 ntBASIC4.85□□□□□ -1.63
Sox6P40645 Gm13787-201ENSMUST00000120422 168 ntBASIC4.85□□□□□ -1.63
Sox6P40645 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Sox6P40645 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC4.85□□□□□ -1.63
Sox6P40645 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Sox6P40645 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Sox6P40645 Gm24940-201ENSMUST00000158326 108 ntBASIC4.85□□□□□ -1.63
Sox6P40645 Gm26172-201ENSMUST00000158421 134 ntBASIC4.85□□□□□ -1.63
Sox6P40645 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Sox6P40645 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
Sox6P40645 Mir6417-201ENSMUST00000183815 116 ntBASIC4.85□□□□□ -1.63
Sox6P40645 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Sox6P40645 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Sox6P40645 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC4.85□□□□□ -1.63
Sox6P40645 Gm2142-201ENSMUST00000197899 589 ntBASIC4.85□□□□□ -1.63
Sox6P40645 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC4.85□□□□□ -1.63
Sox6P40645 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC4.85□□□□□ -1.63
Sox6P40645 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC4.85□□□□□ -1.63
Sox6P40645 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC4.85□□□□□ -1.63
Sox6P40645 Gm18587-201ENSMUST00000213736 841 ntBASIC4.85□□□□□ -1.63
Sox6P40645 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC4.85□□□□□ -1.63
Sox6P40645 Gm18541-201ENSMUST00000215935 538 ntBASIC4.85□□□□□ -1.63
Sox6P40645 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Sox6P40645 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.85□□□□□ -1.63
Sox6P40645 Gm6362-201ENSMUST00000217686 836 ntBASIC4.85□□□□□ -1.63
Sox6P40645 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC4.85□□□□□ -1.63
Sox6P40645 AC164164.2-201ENSMUST00000221809 785 ntBASIC4.85□□□□□ -1.63
Sox6P40645 Gm272-201ENSMUST00000222073 919 ntBASIC4.85□□□□□ -1.63
Sox6P40645 AC134860.4-201ENSMUST00000223592 978 ntBASIC4.85□□□□□ -1.63
Sox6P40645 CT025579.3-201ENSMUST00000224543 451 ntBASIC4.85□□□□□ -1.63
Sox6P40645 AC192333.6-201ENSMUST00000224565 725 ntBASIC4.85□□□□□ -1.63
Sox6P40645 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Sox6P40645 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Sox6P40645 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.85□□□□□ -1.63
Sox6P40645 Mir7-2-201ENSMUST00000083675 97 ntBASIC4.85□□□□□ -1.63
Sox6P40645 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Sox6P40645 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Sox6P40645 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Sox6P40645 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Sox6P40645 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Sox6P40645 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.85□□□□□ -1.63
Sox6P40645 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
Sox6P40645 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Sox6P40645 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Sox6P40645 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
Sox6P40645 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Sox6P40645 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.84□□□□□ -1.63
Sox6P40645 Gm37357-201ENSMUST00000192386 3123 ntBASIC4.84□□□□□ -1.63
Sox6P40645 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Sox6P40645 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Sox6P40645 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Sox6P40645 Neat1-201ENSMUST00000173672 20771 ntBASIC4.84□□□□□ -1.63
Sox6P40645 Gm45819-201ENSMUST00000210940 1751 ntBASIC4.84□□□□□ -1.63
Sox6P40645 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC4.84□□□□□ -1.63
Sox6P40645 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Sox6P40645 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms