Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
P20040 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
P20040 Gm3962-201ENSMUST00000173027 2587 ntBASIC4.63□□□□□ -1.67
P20040 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC4.63□□□□□ -1.67
P20040 Gm38368-201ENSMUST00000193181 1335 ntBASIC4.63□□□□□ -1.67
P20040 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
P20040 Gm37628-201ENSMUST00000194644 5440 ntBASIC4.63□□□□□ -1.67
P20040 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
P20040 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
P20040 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
P20040 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC4.62□□□□□ -1.67
P20040 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC4.62□□□□□ -1.67
P20040 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
P20040 Gm20667-201ENSMUST00000175674 1930 ntBASIC4.62□□□□□ -1.67
P20040 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
P20040 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
P20040 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
P20040 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
P20040 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
P20040 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
P20040 Gm44801-201ENSMUST00000207644 2060 ntBASIC4.62□□□□□ -1.67
P20040 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC4.62□□□□□ -1.67
P20040 AC153959.1-201ENSMUST00000213617 1694 ntBASIC4.62□□□□□ -1.67
P20040 AC117769.3-201ENSMUST00000225814 1664 ntBASIC4.62□□□□□ -1.67
P20040 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
P20040 Gm23750-201ENSMUST00000104222 132 ntBASIC4.62□□□□□ -1.67
P20040 Gm24235-201ENSMUST00000104319 129 ntBASIC4.62□□□□□ -1.67
P20040 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
P20040 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
P20040 Gm9427-201ENSMUST00000116187 651 ntBASIC4.62□□□□□ -1.67
P20040 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC4.62□□□□□ -1.67
P20040 Gm13451-201ENSMUST00000117649 592 ntBASIC4.62□□□□□ -1.67
P20040 Gm9429-201ENSMUST00000117804 868 ntBASIC4.62□□□□□ -1.67
P20040 Gm11677-201ENSMUST00000121349 977 ntBASIC4.62□□□□□ -1.67
P20040 Gm3757-201ENSMUST00000125878 675 ntBASIC4.62□□□□□ -1.67
P20040 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
P20040 Gm17907-201ENSMUST00000173150 710 ntBASIC4.62□□□□□ -1.67
P20040 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC4.62□□□□□ -1.67
P20040 Gm21909-201ENSMUST00000178260 439 ntBASIC4.62□□□□□ -1.67
P20040 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
P20040 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
P20040 Gm28660-201ENSMUST00000186496 253 ntBASIC4.62□□□□□ -1.67
P20040 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC4.62□□□□□ -1.67
P20040 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
P20040 Gm6261-201ENSMUST00000204707 760 ntBASIC4.62□□□□□ -1.67
P20040 Gm44673-201ENSMUST00000205692 996 ntBASIC4.62□□□□□ -1.67
P20040 Gm45700-201ENSMUST00000205866 347 ntBASIC4.62□□□□□ -1.67
P20040 Gm4587-201ENSMUST00000209135 637 ntBASIC4.62□□□□□ -1.67
P20040 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
P20040 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC4.62□□□□□ -1.67
P20040 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC4.62□□□□□ -1.67
P20040 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
P20040 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC4.62□□□□□ -1.67
P20040 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC4.62□□□□□ -1.67
P20040 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC4.62□□□□□ -1.67
P20040 Gm22456-201ENSMUST00000082578 125 ntBASIC4.62□□□□□ -1.67
P20040 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC4.62□□□□□ -1.67
P20040 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
P20040 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
P20040 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
P20040 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
P20040 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
P20040 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
P20040 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
P20040 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
P20040 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
P20040 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
P20040 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
P20040 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.61□□□□□ -1.67
P20040 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC4.61□□□□□ -1.67
P20040 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
P20040 Gm19666-201ENSMUST00000198176 1893 ntBASIC4.61□□□□□ -1.67
P20040 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
P20040 Gm15754-201ENSMUST00000119191 478 ntBASIC4.61□□□□□ -1.67
P20040 Gm12288-201ENSMUST00000121054 1282 ntBASIC4.61□□□□□ -1.67
P20040 Gm15428-201ENSMUST00000121352 333 ntBASIC4.61□□□□□ -1.67
P20040 Gm23883-201ENSMUST00000122686 290 ntBASIC4.61□□□□□ -1.67
P20040 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC4.61□□□□□ -1.67
P20040 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC4.61□□□□□ -1.67
P20040 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
P20040 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC4.61□□□□□ -1.67
P20040 Gm23958-201ENSMUST00000157207 105 ntBASIC4.61□□□□□ -1.67
P20040 Gm24175-201ENSMUST00000158931 129 ntBASIC4.61□□□□□ -1.67
P20040 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC4.61□□□□□ -1.67
P20040 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
P20040 Mir3080-201ENSMUST00000175010 79 ntBASIC4.61□□□□□ -1.67
P20040 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC4.61□□□□□ -1.67
P20040 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
P20040 Gm27225-201ENSMUST00000183833 557 ntBASIC4.61□□□□□ -1.67
P20040 Gm6717-201ENSMUST00000185549 838 ntBASIC4.61□□□□□ -1.67
P20040 Gm2914-201ENSMUST00000186120 328 ntBASIC4.61□□□□□ -1.67
P20040 Gm28923-201ENSMUST00000187755 322 ntBASIC4.61□□□□□ -1.67
P20040 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
P20040 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC4.61□□□□□ -1.67
P20040 Gm29755-201ENSMUST00000196976 948 ntBASIC4.61□□□□□ -1.67
P20040 Gm42663-201ENSMUST00000199883 351 ntBASIC4.61□□□□□ -1.67
P20040 Gm43554-201ENSMUST00000199987 186 ntBASIC4.61□□□□□ -1.67
P20040 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC4.61□□□□□ -1.67
P20040 Gm44003-201ENSMUST00000203024 490 ntBASIC4.61□□□□□ -1.67
P20040 Gm18011-201ENSMUST00000203717 565 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms