Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm13890-201ENSMUST00000117578 390 ntBASIC5.37□□□□□ -1.55
Lire1P11260 Gm13451-201ENSMUST00000117649 592 ntBASIC5.37□□□□□ -1.55
Lire1P11260 Gm12399-201ENSMUST00000121475 446 ntBASIC5.37□□□□□ -1.55
Lire1P11260 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC5.37□□□□□ -1.55
Lire1P11260 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Lire1P11260 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Lire1P11260 Gm25332-201ENSMUST00000158038 105 ntBASIC5.37□□□□□ -1.55
Lire1P11260 Gm16164-201ENSMUST00000160078 468 ntBASIC5.37□□□□□ -1.55
Lire1P11260 Gm6808-201ENSMUST00000162341 807 ntBASIC5.37□□□□□ -1.55
Lire1P11260 Gm6541-201ENSMUST00000165542 561 ntBASIC5.37□□□□□ -1.55
Lire1P11260 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Lire1P11260 Gm15143-201ENSMUST00000178180 714 ntBASIC5.37□□□□□ -1.55
Lire1P11260 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Lire1P11260 Gm8703-201ENSMUST00000203793 730 ntBASIC5.37□□□□□ -1.55
Lire1P11260 Gm44940-201ENSMUST00000206225 1247 ntBASIC5.37□□□□□ -1.55
Lire1P11260 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC5.37□□□□□ -1.55
Lire1P11260 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC5.37□□□□□ -1.55
Lire1P11260 Gm3690-201ENSMUST00000211341 262 ntBASIC5.37□□□□□ -1.55
Lire1P11260 LOC665443-201ENSMUST00000212284 796 ntBASIC5.37□□□□□ -1.55
Lire1P11260 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.37□□□□□ -1.55
Lire1P11260 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.37□□□□□ -1.55
Lire1P11260 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Lire1P11260 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Lire1P11260 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Lire1P11260 Gm22423-201ENSMUST00000082861 184 ntBASIC5.37□□□□□ -1.55
Lire1P11260 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Lire1P11260 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC5.37□□□□□ -1.55
Lire1P11260 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Lire1P11260 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Lire1P11260 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Lire1P11260 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Lire1P11260 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Lire1P11260 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Lire1P11260 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Lire1P11260 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Lire1P11260 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Lire1P11260 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Lire1P11260 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Lire1P11260 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Lire1P11260 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Lire1P11260 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC5.36□□□□□ -1.55
Lire1P11260 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Lire1P11260 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Lire1P11260 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Lire1P11260 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Lire1P11260 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Lire1P11260 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Lire1P11260 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Lire1P11260 Gm25919-201ENSMUST00000104271 132 ntBASIC5.36□□□□□ -1.55
Lire1P11260 Gm25564-201ENSMUST00000104604 132 ntBASIC5.36□□□□□ -1.55
Lire1P11260 Gm13245-201ENSMUST00000119646 260 ntBASIC5.36□□□□□ -1.55
Lire1P11260 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC5.36□□□□□ -1.55
Lire1P11260 Gm13366-201ENSMUST00000122198 970 ntBASIC5.36□□□□□ -1.55
Lire1P11260 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC5.36□□□□□ -1.55
Lire1P11260 Gm2182-201ENSMUST00000145243 663 ntBASIC5.36□□□□□ -1.55
Lire1P11260 Gm25553-201ENSMUST00000158076 79 ntBASIC5.36□□□□□ -1.55
Lire1P11260 Gm22160-201ENSMUST00000158405 328 ntBASIC5.36□□□□□ -1.55
Lire1P11260 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC5.36□□□□□ -1.55
Lire1P11260 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Lire1P11260 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.36□□□□□ -1.55
Lire1P11260 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Lire1P11260 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC5.36□□□□□ -1.55
Lire1P11260 Gm18522-201ENSMUST00000173947 650 ntBASIC5.36□□□□□ -1.55
Lire1P11260 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC5.36□□□□□ -1.55
Lire1P11260 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.36□□□□□ -1.55
Lire1P11260 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.36□□□□□ -1.55
Lire1P11260 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Lire1P11260 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Lire1P11260 Gm27004-201ENSMUST00000183300 727 ntBASIC5.36□□□□□ -1.55
Lire1P11260 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC5.36□□□□□ -1.55
Lire1P11260 Gm37293-201ENSMUST00000191658 295 ntBASIC5.36□□□□□ -1.55
Lire1P11260 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.36□□□□□ -1.55
Lire1P11260 Gm38283-201ENSMUST00000193041 695 ntBASIC5.36□□□□□ -1.55
Lire1P11260 Gm37838-201ENSMUST00000194464 312 ntBASIC5.36□□□□□ -1.55
Lire1P11260 Gm37196-201ENSMUST00000194762 906 ntBASIC5.36□□□□□ -1.55
Lire1P11260 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Lire1P11260 Gm31211-201ENSMUST00000199170 253 ntBASIC5.36□□□□□ -1.55
Lire1P11260 Gm32158-201ENSMUST00000200135 404 ntBASIC5.36□□□□□ -1.55
Lire1P11260 Gm44768-201ENSMUST00000205719 393 ntBASIC5.36□□□□□ -1.55
Lire1P11260 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Lire1P11260 Gm45359-201ENSMUST00000210635 427 ntBASIC5.36□□□□□ -1.55
Lire1P11260 Gm33242-201ENSMUST00000212130 1057 ntBASIC5.36□□□□□ -1.55
Lire1P11260 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.36□□□□□ -1.55
Lire1P11260 AC159886.1-201ENSMUST00000217099 1091 ntBASIC5.36□□□□□ -1.55
Lire1P11260 Gm46192-201ENSMUST00000217894 326 ntBASIC5.36□□□□□ -1.55
Lire1P11260 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Lire1P11260 Gm2614-201ENSMUST00000223227 403 ntBASIC5.36□□□□□ -1.55
Lire1P11260 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.36□□□□□ -1.55
Lire1P11260 AC165437.1-201ENSMUST00000228640 536 ntBASIC5.36□□□□□ -1.55
Lire1P11260 Gm10062-201ENSMUST00000072180 1470 ntBASIC5.36□□□□□ -1.55
Lire1P11260 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Lire1P11260 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Lire1P11260 AC152981.1-201ENSMUST00000218320 2480 ntBASIC5.36□□□□□ -1.55
Lire1P11260 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
Lire1P11260 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Lire1P11260 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Lire1P11260 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Lire1P11260 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.36□□□□□ -1.55
Lire1P11260 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Lire1P11260 Gm44209-201ENSMUST00000204556 4153 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms