Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 AC159205.4-201ENSMUST00000225964 704 ntBASIC4.09□□□□□ -1.75
Hmgb3O54879 AC154436.2-201ENSMUST00000227408 208 ntBASIC4.09□□□□□ -1.75
Hmgb3O54879 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.09□□□□□ -1.75
Hmgb3O54879 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Hmgb3O54879 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Hmgb3O54879 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.09□□□□□ -1.75
Hmgb3O54879 AC124556.1-201ENSMUST00000218256 1319 ntBASIC4.09□□□□□ -1.75
Hmgb3O54879 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Hmgb3O54879 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Hmgb3O54879 Gm43266-201ENSMUST00000201049 1771 ntBASIC4.09□□□□□ -1.76
Hmgb3O54879 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.09□□□□□ -1.76
Hmgb3O54879 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Hmgb3O54879 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Hmgb3O54879 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Hmgb3O54879 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Hmgb3O54879 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Hmgb3O54879 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Hmgb3O54879 Gm23746-201ENSMUST00000104229 125 ntBASIC4.08□□□□□ -1.76
Hmgb3O54879 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Hmgb3O54879 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Hmgb3O54879 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC4.08□□□□□ -1.76
Hmgb3O54879 Gm12717-201ENSMUST00000118427 983 ntBASIC4.08□□□□□ -1.76
Hmgb3O54879 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.08□□□□□ -1.76
Hmgb3O54879 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Hmgb3O54879 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Hmgb3O54879 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Hmgb3O54879 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Hmgb3O54879 Gm22636-201ENSMUST00000158142 275 ntBASIC4.08□□□□□ -1.76
Hmgb3O54879 Gm17152-201ENSMUST00000172430 535 ntBASIC4.08□□□□□ -1.76
Hmgb3O54879 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC4.08□□□□□ -1.76
Hmgb3O54879 Gm20637-201ENSMUST00000175715 462 ntBASIC4.08□□□□□ -1.76
Hmgb3O54879 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Hmgb3O54879 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Hmgb3O54879 Gm24957-201ENSMUST00000179604 132 ntBASIC4.08□□□□□ -1.76
Hmgb3O54879 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Hmgb3O54879 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Hmgb3O54879 Gm27528-201ENSMUST00000183544 205 ntBASIC4.08□□□□□ -1.76
Hmgb3O54879 Gm27818-201ENSMUST00000184536 159 ntBASIC4.08□□□□□ -1.76
Hmgb3O54879 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Hmgb3O54879 Gm37191-201ENSMUST00000193346 388 ntBASIC4.08□□□□□ -1.76
Hmgb3O54879 Gm36963-201ENSMUST00000193506 2324 ntBASIC4.08□□□□□ -1.76
Hmgb3O54879 Gm37308-201ENSMUST00000194684 100 ntBASIC4.08□□□□□ -1.76
Hmgb3O54879 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC4.08□□□□□ -1.76
Hmgb3O54879 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC4.08□□□□□ -1.76
Hmgb3O54879 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Hmgb3O54879 Mir409-201ENSMUST00000198153 79 ntBASIC4.08□□□□□ -1.76
Hmgb3O54879 Gm42666-201ENSMUST00000201954 152 ntBASIC4.08□□□□□ -1.76
Hmgb3O54879 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC4.08□□□□□ -1.76
Hmgb3O54879 AC153516.1-201ENSMUST00000217955 779 ntBASIC4.08□□□□□ -1.76
Hmgb3O54879 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC4.08□□□□□ -1.76
Hmgb3O54879 AC155941.1-201ENSMUST00000220223 529 ntBASIC4.08□□□□□ -1.76
Hmgb3O54879 AC157515.1-201ENSMUST00000220953 450 ntBASIC4.08□□□□□ -1.76
Hmgb3O54879 AC117237.1-201ENSMUST00000224035 395 ntBASIC4.08□□□□□ -1.76
Hmgb3O54879 AC115760.1-201ENSMUST00000225160 1327 ntBASIC4.08□□□□□ -1.76
Hmgb3O54879 Nsa2-203ENSMUST00000225410 974 ntBASIC4.08□□□□□ -1.76
Hmgb3O54879 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Hmgb3O54879 AC170999.1-201ENSMUST00000226359 1585 ntBASIC4.08□□□□□ -1.76
Hmgb3O54879 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Hmgb3O54879 Gm25260-201ENSMUST00000083053 134 ntBASIC4.08□□□□□ -1.76
Hmgb3O54879 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
Hmgb3O54879 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Hmgb3O54879 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Hmgb3O54879 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Hmgb3O54879 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC4.07□□□□□ -1.76
Hmgb3O54879 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Hmgb3O54879 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Hmgb3O54879 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Hmgb3O54879 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.07□□□□□ -1.76
Hmgb3O54879 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Hmgb3O54879 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Hmgb3O54879 Gm45885-202ENSMUST00000211520 1383 ntBASIC4.07□□□□□ -1.76
Hmgb3O54879 Gm37205-201ENSMUST00000194820 2736 ntBASIC4.07□□□□□ -1.76
Hmgb3O54879 Gm37589-201ENSMUST00000193609 3994 ntBASIC4.07□□□□□ -1.76
Hmgb3O54879 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Hmgb3O54879 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Hmgb3O54879 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Hmgb3O54879 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Hmgb3O54879 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Hmgb3O54879 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Hmgb3O54879 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
Hmgb3O54879 Gm14575-201ENSMUST00000117210 560 ntBASIC4.07□□□□□ -1.76
Hmgb3O54879 Gm12583-201ENSMUST00000120677 853 ntBASIC4.07□□□□□ -1.76
Hmgb3O54879 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Hmgb3O54879 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC4.07□□□□□ -1.76
Hmgb3O54879 Gm25117-201ENSMUST00000157194 144 ntBASIC4.07□□□□□ -1.76
Hmgb3O54879 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Hmgb3O54879 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Hmgb3O54879 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Hmgb3O54879 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC4.07□□□□□ -1.76
Hmgb3O54879 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC4.07□□□□□ -1.76
Hmgb3O54879 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Hmgb3O54879 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Hmgb3O54879 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Hmgb3O54879 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Hmgb3O54879 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Hmgb3O54879 Gm2914-201ENSMUST00000186120 328 ntBASIC4.07□□□□□ -1.76
Hmgb3O54879 Gm9443-201ENSMUST00000188406 816 ntBASIC4.07□□□□□ -1.76
Hmgb3O54879 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Hmgb3O54879 Gm42522-201ENSMUST00000196071 255 ntBASIC4.07□□□□□ -1.76
Hmgb3O54879 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms