Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ccdc180J3QNE4 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ccdc180J3QNE4 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Ccdc180J3QNE4 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ccdc180J3QNE4 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
Ccdc180J3QNE4 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ccdc180J3QNE4 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Ccdc180J3QNE4 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ccdc180J3QNE4 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ccdc180J3QNE4 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
Ccdc180J3QNE4 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
Ccdc180J3QNE4 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Ccdc180J3QNE4 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Ccdc180J3QNE4 Gm45697-201ENSMUST00000212893 2876 ntBASIC9.36□□□□□ -0.91
Ccdc180J3QNE4 AW046200-203ENSMUST00000211787 2479 ntBASIC9.36□□□□□ -0.91
Ccdc180J3QNE4 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccdc180J3QNE4 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC9.36□□□□□ -0.91
Ccdc180J3QNE4 n-R5s61-201ENSMUST00000122711 118 ntBASIC9.36□□□□□ -0.91
Ccdc180J3QNE4 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC9.36□□□□□ -0.91
Ccdc180J3QNE4 Gm22277-201ENSMUST00000157204 277 ntBASIC9.36□□□□□ -0.91
Ccdc180J3QNE4 Gm15796-201ENSMUST00000162135 204 ntBASIC9.36□□□□□ -0.91
Ccdc180J3QNE4 Gm25534-201ENSMUST00000175365 125 ntBASIC9.36□□□□□ -0.91
Ccdc180J3QNE4 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ccdc180J3QNE4 Gm37670-201ENSMUST00000193622 229 ntBASIC9.36□□□□□ -0.91
Ccdc180J3QNE4 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccdc180J3QNE4 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ccdc180J3QNE4 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccdc180J3QNE4 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccdc180J3QNE4 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccdc180J3QNE4 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC9.36□□□□□ -0.91
Ccdc180J3QNE4 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Ccdc180J3QNE4 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccdc180J3QNE4 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Ccdc180J3QNE4 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Ccdc180J3QNE4 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccdc180J3QNE4 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccdc180J3QNE4 Gm24170-201ENSMUST00000104124 133 ntBASIC9.36□□□□□ -0.91
Ccdc180J3QNE4 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccdc180J3QNE4 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC9.36□□□□□ -0.91
Ccdc180J3QNE4 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC9.36□□□□□ -0.91
Ccdc180J3QNE4 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc180J3QNE4 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc180J3QNE4 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc180J3QNE4 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Ccdc180J3QNE4 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC9.35□□□□□ -0.91
Ccdc180J3QNE4 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Ccdc180J3QNE4 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC9.35□□□□□ -0.91
Ccdc180J3QNE4 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC9.35□□□□□ -0.91
Ccdc180J3QNE4 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC9.35□□□□□ -0.91
Ccdc180J3QNE4 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC9.35□□□□□ -0.91
Ccdc180J3QNE4 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC9.35□□□□□ -0.91
Ccdc180J3QNE4 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc180J3QNE4 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc180J3QNE4 Gm11196-201ENSMUST00000119052 395 ntBASIC9.35□□□□□ -0.91
Ccdc180J3QNE4 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc180J3QNE4 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc180J3QNE4 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC9.35□□□□□ -0.91
Ccdc180J3QNE4 Gm38011-201ENSMUST00000193312 279 ntBASIC9.35□□□□□ -0.91
Ccdc180J3QNE4 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC9.35□□□□□ -0.91
Ccdc180J3QNE4 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC9.35□□□□□ -0.91
Ccdc180J3QNE4 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC9.35□□□□□ -0.91
Ccdc180J3QNE4 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc180J3QNE4 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC9.35□□□□□ -0.91
Ccdc180J3QNE4 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc180J3QNE4 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc180J3QNE4 Gm9577-201ENSMUST00000174655 2620 ntBASIC9.35□□□□□ -0.91
Ccdc180J3QNE4 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Ccdc180J3QNE4 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ccdc180J3QNE4 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ccdc180J3QNE4 Gm43523-201ENSMUST00000197397 2878 ntBASIC9.34□□□□□ -0.91
Ccdc180J3QNE4 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC9.34□□□□□ -0.91
Ccdc180J3QNE4 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC9.34□□□□□ -0.91
Ccdc180J3QNE4 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC9.34□□□□□ -0.91
Ccdc180J3QNE4 Gm29036-201ENSMUST00000189967 877 ntBASIC9.34□□□□□ -0.91
Ccdc180J3QNE4 Mir5121-201ENSMUST00000198528 74 ntBASIC9.34□□□□□ -0.91
Ccdc180J3QNE4 Gm6366-201ENSMUST00000198766 826 ntBASIC9.34□□□□□ -0.91
Ccdc180J3QNE4 AV026068-220ENSMUST00000224153 1147 ntBASIC9.34□□□□□ -0.91
Ccdc180J3QNE4 AV026068-224ENSMUST00000224827 928 ntBASIC9.34□□□□□ -0.91
Ccdc180J3QNE4 AC102542.1-201ENSMUST00000225204 1138 ntBASIC9.34□□□□□ -0.91
Ccdc180J3QNE4 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Ccdc180J3QNE4 Gm42860-201ENSMUST00000196492 3991 ntBASIC9.34□□□□□ -0.91
Ccdc180J3QNE4 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Ccdc180J3QNE4 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ccdc180J3QNE4 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ccdc180J3QNE4 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ccdc180J3QNE4 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Ccdc180J3QNE4 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC9.33□□□□□ -0.92
Ccdc180J3QNE4 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Ccdc180J3QNE4 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Ccdc180J3QNE4 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC9.33□□□□□ -0.92
Ccdc180J3QNE4 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Ccdc180J3QNE4 Gm11633-201ENSMUST00000118176 444 ntBASIC9.33□□□□□ -0.92
Ccdc180J3QNE4 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC9.33□□□□□ -0.92
Ccdc180J3QNE4 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC9.33□□□□□ -0.92
Ccdc180J3QNE4 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ccdc180J3QNE4 Gm19206-201ENSMUST00000186401 827 ntBASIC9.33□□□□□ -0.92
Ccdc180J3QNE4 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ccdc180J3QNE4 Gm43350-201ENSMUST00000196382 711 ntBASIC9.33□□□□□ -0.92
Ccdc180J3QNE4 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC9.33□□□□□ -0.92
Ccdc180J3QNE4 Gm8189-203ENSMUST00000211159 1225 ntBASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 106.8 ms