Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm6543-201ENSMUST00000197353 808 ntBASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm43382-201ENSMUST00000198954 838 ntBASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 AC158803.2-201ENSMUST00000219452 679 ntBASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC5.01□□□□□ -1.61
Lima1Q9ERG0 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Olfr192-201ENSMUST00000080251 925 ntBASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Lima1Q9ERG0 AC165106.3-201ENSMUST00000228191 3843 ntBASIC5□□□□□ -1.61
Lima1Q9ERG0 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5□□□□□ -1.61
Lima1Q9ERG0 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5□□□□□ -1.61
Lima1Q9ERG0 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC5□□□□□ -1.61
Lima1Q9ERG0 Gm37767-201ENSMUST00000193239 1834 ntBASIC5□□□□□ -1.61
Lima1Q9ERG0 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5□□□□□ -1.61
Lima1Q9ERG0 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Lima1Q9ERG0 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
Lima1Q9ERG0 Gm11486-201ENSMUST00000107322 478 ntBASIC5□□□□□ -1.61
Lima1Q9ERG0 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Lima1Q9ERG0 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
Lima1Q9ERG0 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Lima1Q9ERG0 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5□□□□□ -1.61
Lima1Q9ERG0 Gm8129-201ENSMUST00000118230 213 ntBASIC5□□□□□ -1.61
Lima1Q9ERG0 Gm15428-201ENSMUST00000121352 333 ntBASIC5□□□□□ -1.61
Lima1Q9ERG0 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Lima1Q9ERG0 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5□□□□□ -1.61
Lima1Q9ERG0 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5□□□□□ -1.61
Lima1Q9ERG0 Gm24940-201ENSMUST00000158326 108 ntBASIC5□□□□□ -1.61
Lima1Q9ERG0 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC5□□□□□ -1.61
Lima1Q9ERG0 Gm22698-201ENSMUST00000175375 108 ntBASIC5□□□□□ -1.61
Lima1Q9ERG0 Gm23617-201ENSMUST00000175410 95 ntBASIC5□□□□□ -1.61
Lima1Q9ERG0 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC5□□□□□ -1.61
Lima1Q9ERG0 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC5□□□□□ -1.61
Lima1Q9ERG0 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
Lima1Q9ERG0 Gm23450-201ENSMUST00000178285 91 ntBASIC5□□□□□ -1.61
Lima1Q9ERG0 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC5□□□□□ -1.61
Lima1Q9ERG0 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC5□□□□□ -1.61
Lima1Q9ERG0 Gm27762-201ENSMUST00000183417 109 ntBASIC5□□□□□ -1.61
Lima1Q9ERG0 Mir6973b-201ENSMUST00000184185 80 ntBASIC5□□□□□ -1.61
Lima1Q9ERG0 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC5□□□□□ -1.61
Lima1Q9ERG0 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
Lima1Q9ERG0 Gm18350-201ENSMUST00000187395 955 ntBASIC5□□□□□ -1.61
Lima1Q9ERG0 Gm21803-201ENSMUST00000188897 693 ntBASIC5□□□□□ -1.61
Lima1Q9ERG0 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5□□□□□ -1.61
Lima1Q9ERG0 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5□□□□□ -1.61
Lima1Q9ERG0 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC5□□□□□ -1.61
Lima1Q9ERG0 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
Lima1Q9ERG0 Gm43036-201ENSMUST00000200594 373 ntBASIC5□□□□□ -1.61
Lima1Q9ERG0 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC5□□□□□ -1.61
Lima1Q9ERG0 AC156950.1-201ENSMUST00000219604 456 ntBASIC5□□□□□ -1.61
Lima1Q9ERG0 AC122301.1-201ENSMUST00000219625 507 ntBASIC5□□□□□ -1.61
Lima1Q9ERG0 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Lima1Q9ERG0 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC5□□□□□ -1.61
Lima1Q9ERG0 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Lima1Q9ERG0 Mir20a-201ENSMUST00000083508 107 ntBASIC5□□□□□ -1.61
Lima1Q9ERG0 Mir129-1-201ENSMUST00000083535 73 ntBASIC5□□□□□ -1.61
Lima1Q9ERG0 Gm42910-201ENSMUST00000198917 2921 ntBASIC5□□□□□ -1.61
Lima1Q9ERG0 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC5□□□□□ -1.61
Lima1Q9ERG0 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Lima1Q9ERG0 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Lima1Q9ERG0 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Lima1Q9ERG0 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Lima1Q9ERG0 Gm38029-201ENSMUST00000192669 2090 ntBASIC5□□□□□ -1.61
Lima1Q9ERG0 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5□□□□□ -1.61
Lima1Q9ERG0 Gm38243-201ENSMUST00000194737 1567 ntBASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Gm37509-201ENSMUST00000194867 3169 ntBASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Gm37488-201ENSMUST00000195434 3374 ntBASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Gm23910-201ENSMUST00000104597 132 ntBASIC4.99□□□□□ -1.61
Lima1Q9ERG0 Gm14836-201ENSMUST00000118567 471 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms