Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Gm43845-201ENSMUST00000202462 1820 ntBASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Cdc40Q9DC48 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Gm38351-201ENSMUST00000195466 2518 ntBASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Gm9923-201ENSMUST00000217785 1836 ntBASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cdc40Q9DC48 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Gm11278-201ENSMUST00000121002 997 ntBASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Gm7609-204ENSMUST00000161424 461 ntBASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Gm26318-201ENSMUST00000176507 96 ntBASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Gm27543-201ENSMUST00000183562 177 ntBASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Gm27468-201ENSMUST00000183577 106 ntBASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Gm27781-201ENSMUST00000185185 92 ntBASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Gm28683-201ENSMUST00000187134 615 ntBASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Gm28061-201ENSMUST00000189085 807 ntBASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Gm28840-205ENSMUST00000189320 615 ntBASIC4.91□□□□□ -1.62
Cdc40Q9DC48 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Gm28835-203ENSMUST00000190062 615 ntBASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC4.91□□□□□ -1.62
Cdc40Q9DC48 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Gm44214-201ENSMUST00000204153 606 ntBASIC4.91□□□□□ -1.62
Cdc40Q9DC48 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Gm18541-201ENSMUST00000215935 538 ntBASIC4.91□□□□□ -1.62
Cdc40Q9DC48 AC156950.1-201ENSMUST00000219604 456 ntBASIC4.91□□□□□ -1.62
Cdc40Q9DC48 CT009754.4-201ENSMUST00000221430 565 ntBASIC4.91□□□□□ -1.62
Cdc40Q9DC48 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC4.91□□□□□ -1.62
Cdc40Q9DC48 AC156576.2-202ENSMUST00000222525 411 ntBASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC4.91□□□□□ -1.62
Cdc40Q9DC48 AC102291.1-201ENSMUST00000227164 529 ntBASIC4.91□□□□□ -1.62
Cdc40Q9DC48 AC146601.1-201ENSMUST00000227910 905 ntBASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Gm23927-201ENSMUST00000082466 215 ntBASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Gm9077-201ENSMUST00000210657 2298 ntBASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Cdc40Q9DC48 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Gm37485-201ENSMUST00000192326 2953 ntBASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Cdc40Q9DC48 AC122408.2-201ENSMUST00000217901 1391 ntBASIC4.91□□□□□ -1.62
Cdc40Q9DC48 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Cdc40Q9DC48 Gm44801-201ENSMUST00000207644 2060 ntBASIC4.9□□□□□ -1.62
Cdc40Q9DC48 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Cdc40Q9DC48 Gm44739-201ENSMUST00000205294 1426 ntBASIC4.9□□□□□ -1.62
Cdc40Q9DC48 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Cdc40Q9DC48 CT025556.1-201ENSMUST00000222965 1884 ntBASIC4.9□□□□□ -1.62
Cdc40Q9DC48 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Cdc40Q9DC48 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
Cdc40Q9DC48 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Cdc40Q9DC48 Gm42860-201ENSMUST00000196492 3991 ntBASIC4.9□□□□□ -1.62
Cdc40Q9DC48 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Cdc40Q9DC48 Gm11743-201ENSMUST00000117385 1735 ntBASIC4.9□□□□□ -1.62
Cdc40Q9DC48 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Cdc40Q9DC48 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Gm11805-201ENSMUST00000121238 600 ntBASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Gm11507-201ENSMUST00000156462 412 ntBASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Gm18728-201ENSMUST00000186155 753 ntBASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Gm17981-201ENSMUST00000191109 739 ntBASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Ighv1-35-201ENSMUST00000195265 351 ntBASIC4.9□□□□□ -1.63
Cdc40Q9DC48 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Gm7825-201ENSMUST00000204046 416 ntBASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Gm18599-201ENSMUST00000206729 1125 ntBASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Gm18850-201ENSMUST00000211578 388 ntBASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC4.9□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms