Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC5.6□□□□□ -1.51
Vps28Q9D1C8 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Vps28Q9D1C8 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Vps28Q9D1C8 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Vps28Q9D1C8 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Vps28Q9D1C8 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Vps28Q9D1C8 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.6□□□□□ -1.51
Vps28Q9D1C8 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC5.6□□□□□ -1.51
Vps28Q9D1C8 Gm23330-201ENSMUST00000082660 164 ntBASIC5.6□□□□□ -1.51
Vps28Q9D1C8 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Vps28Q9D1C8 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Vps28Q9D1C8 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Vps28Q9D1C8 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
Vps28Q9D1C8 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Vps28Q9D1C8 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Vps28Q9D1C8 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Vps28Q9D1C8 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Vps28Q9D1C8 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Vps28Q9D1C8 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Vps28Q9D1C8 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Vps28Q9D1C8 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Vps28Q9D1C8 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Vps28Q9D1C8 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Vps28Q9D1C8 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Vps28Q9D1C8 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.59□□□□□ -1.51
Vps28Q9D1C8 Gm14874-201ENSMUST00000118995 438 ntBASIC5.59□□□□□ -1.51
Vps28Q9D1C8 Gm14472-201ENSMUST00000119815 282 ntBASIC5.59□□□□□ -1.51
Vps28Q9D1C8 Gm12074-201ENSMUST00000120189 219 ntBASIC5.59□□□□□ -1.51
Vps28Q9D1C8 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC5.59□□□□□ -1.51
Vps28Q9D1C8 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC5.59□□□□□ -1.51
Vps28Q9D1C8 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC5.59□□□□□ -1.51
Vps28Q9D1C8 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5.59□□□□□ -1.51
Vps28Q9D1C8 Gm26489-201ENSMUST00000157880 264 ntBASIC5.59□□□□□ -1.51
Vps28Q9D1C8 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC5.59□□□□□ -1.51
Vps28Q9D1C8 Gm28967-201ENSMUST00000187351 281 ntBASIC5.59□□□□□ -1.51
Vps28Q9D1C8 Gm18969-201ENSMUST00000189423 730 ntBASIC5.59□□□□□ -1.51
Vps28Q9D1C8 Gm37503-201ENSMUST00000192088 319 ntBASIC5.59□□□□□ -1.51
Vps28Q9D1C8 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.59□□□□□ -1.51
Vps28Q9D1C8 Gm6543-201ENSMUST00000197353 808 ntBASIC5.59□□□□□ -1.51
Vps28Q9D1C8 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC5.59□□□□□ -1.51
Vps28Q9D1C8 Gm44673-201ENSMUST00000205692 996 ntBASIC5.59□□□□□ -1.51
Vps28Q9D1C8 Gm45247-201ENSMUST00000210757 309 ntBASIC5.59□□□□□ -1.51
Vps28Q9D1C8 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC5.59□□□□□ -1.51
Vps28Q9D1C8 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC5.59□□□□□ -1.51
Vps28Q9D1C8 Gm4012-201ENSMUST00000221504 581 ntBASIC5.59□□□□□ -1.51
Vps28Q9D1C8 AC154583.1-201ENSMUST00000224788 655 ntBASIC5.59□□□□□ -1.51
Vps28Q9D1C8 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.59□□□□□ -1.51
Vps28Q9D1C8 AC164295.2-201ENSMUST00000228539 757 ntBASIC5.59□□□□□ -1.51
Vps28Q9D1C8 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.59□□□□□ -1.51
Vps28Q9D1C8 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.59□□□□□ -1.51
Vps28Q9D1C8 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Vps28Q9D1C8 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
Vps28Q9D1C8 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.59□□□□□ -1.52
Vps28Q9D1C8 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Vps28Q9D1C8 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Gm13451-201ENSMUST00000117649 592 ntBASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Gm15490-201ENSMUST00000119894 387 ntBASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Gm15152-201ENSMUST00000121540 394 ntBASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Mir3473c-201ENSMUST00000175262 81 ntBASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Gm27225-201ENSMUST00000183833 557 ntBASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Mir7687-201ENSMUST00000184722 59 ntBASIC5.58□□□□□ -1.52
Vps28Q9D1C8 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Gm45269-201ENSMUST00000210359 282 ntBASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Gm5176-201ENSMUST00000218244 1227 ntBASIC5.58□□□□□ -1.52
Vps28Q9D1C8 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Vps28Q9D1C8 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.58□□□□□ -1.52
Vps28Q9D1C8 AC160120.1-201ENSMUST00000227446 663 ntBASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Mir133b-201ENSMUST00000083546 119 ntBASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Vps28Q9D1C8 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms