Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.96□□□□□ -1.46
Smc1aQ9CU62 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
Smc1aQ9CU62 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC5.96□□□□□ -1.46
Smc1aQ9CU62 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC5.96□□□□□ -1.46
Smc1aQ9CU62 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Smc1aQ9CU62 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Gm12683-201ENSMUST00000117528 415 ntBASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Gm11826-201ENSMUST00000118781 438 ntBASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Gm8358-201ENSMUST00000167222 555 ntBASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Gm17907-201ENSMUST00000173150 710 ntBASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Gm20545-201ENSMUST00000174739 210 ntBASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Gm26318-201ENSMUST00000176507 96 ntBASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Mir6343-201ENSMUST00000183584 84 ntBASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Gm37720-201ENSMUST00000195497 1241 ntBASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Gm18482-201ENSMUST00000202405 760 ntBASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Gm18850-201ENSMUST00000211578 388 ntBASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Gm18904-201ENSMUST00000218756 329 ntBASIC5.95□□□□□ -1.46
Smc1aQ9CU62 AC154323.1-201ENSMUST00000228329 1231 ntBASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Smc1aQ9CU62 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Gm17101-201ENSMUST00000169520 1588 ntBASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Gm15981-201ENSMUST00000119196 457 ntBASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Gm14957-201ENSMUST00000121069 817 ntBASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Gm26069-201ENSMUST00000157497 277 ntBASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Gm24860-201ENSMUST00000158457 276 ntBASIC5.94□□□□□ -1.46
Smc1aQ9CU62 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Gm22355-201ENSMUST00000175531 96 ntBASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Gm27039-201ENSMUST00000182438 962 ntBASIC5.94□□□□□ -1.46
Smc1aQ9CU62 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Gm28871-201ENSMUST00000186191 687 ntBASIC5.94□□□□□ -1.46
Smc1aQ9CU62 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Gm9278-201ENSMUST00000205508 553 ntBASIC5.94□□□□□ -1.46
Smc1aQ9CU62 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.94□□□□□ -1.46
Smc1aQ9CU62 AC158803.2-201ENSMUST00000219452 679 ntBASIC5.94□□□□□ -1.46
Smc1aQ9CU62 AC129085.4-201ENSMUST00000224536 570 ntBASIC5.94□□□□□ -1.46
Smc1aQ9CU62 AC164597.1-201ENSMUST00000226538 514 ntBASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Mir365-2-201ENSMUST00000083555 112 ntBASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.94□□□□□ -1.46
Smc1aQ9CU62 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.94□□□□□ -1.46
Smc1aQ9CU62 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Smc1aQ9CU62 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms