Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm34165-201ENSMUST00000222012 1174 ntBASIC5.35□□□□□ -1.55
Cstf1Q99LC2 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC5.35□□□□□ -1.55
Cstf1Q99LC2 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Cstf1Q99LC2 AC162183.1-202ENSMUST00000225434 904 ntBASIC5.35□□□□□ -1.55
Cstf1Q99LC2 AC139758.1-201ENSMUST00000226573 930 ntBASIC5.35□□□□□ -1.55
Cstf1Q99LC2 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cstf1Q99LC2 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cstf1Q99LC2 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Cstf1Q99LC2 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cstf1Q99LC2 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cstf1Q99LC2 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cstf1Q99LC2 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.35□□□□□ -1.55
Cstf1Q99LC2 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cstf1Q99LC2 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Cstf1Q99LC2 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.34□□□□□ -1.55
Cstf1Q99LC2 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Gm37370-201ENSMUST00000191996 1410 ntBASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Gm23294-201ENSMUST00000104150 164 ntBASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Gm12005-201ENSMUST00000121451 379 ntBASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cstf1Q99LC2 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Gm25427-201ENSMUST00000157605 103 ntBASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Gm24363-201ENSMUST00000158440 311 ntBASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Gm26925-201ENSMUST00000182470 957 ntBASIC5.34□□□□□ -1.55
Cstf1Q99LC2 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cstf1Q99LC2 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Gm29736-201ENSMUST00000198189 385 ntBASIC5.34□□□□□ -1.55
Cstf1Q99LC2 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC5.34□□□□□ -1.55
Cstf1Q99LC2 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC5.34□□□□□ -1.55
Cstf1Q99LC2 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.34□□□□□ -1.55
Cstf1Q99LC2 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.34□□□□□ -1.55
Cstf1Q99LC2 AC125543.1-201ENSMUST00000222778 101 ntBASIC5.34□□□□□ -1.55
Cstf1Q99LC2 AC154576.2-203ENSMUST00000224736 253 ntBASIC5.34□□□□□ -1.55
Cstf1Q99LC2 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.34□□□□□ -1.55
Cstf1Q99LC2 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.34□□□□□ -1.56
Cstf1Q99LC2 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Cstf1Q99LC2 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Cstf1Q99LC2 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Cstf1Q99LC2 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.33□□□□□ -1.56
Cstf1Q99LC2 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cstf1Q99LC2 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Gm11561-201ENSMUST00000117429 417 ntBASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Gm25291-201ENSMUST00000122795 144 ntBASIC5.33□□□□□ -1.56
Cstf1Q99LC2 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Gm16260-201ENSMUST00000155141 304 ntBASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Gm26153-201ENSMUST00000157433 127 ntBASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Gm23534-201ENSMUST00000157539 97 ntBASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Gm25942-201ENSMUST00000180080 110 ntBASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Mir6410-201ENSMUST00000184204 104 ntBASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Gm28503-201ENSMUST00000185966 147 ntBASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Gm5511-201ENSMUST00000189380 802 ntBASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Gm5734-201ENSMUST00000189787 913 ntBASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Gm22897-202ENSMUST00000197782 127 ntBASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Gm42983-201ENSMUST00000199879 815 ntBASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Gm18510-201ENSMUST00000219335 1096 ntBASIC5.33□□□□□ -1.56
Cstf1Q99LC2 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC5.33□□□□□ -1.56
Cstf1Q99LC2 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Cstf1Q99LC2 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms